KEGG   Alligator mississippiensis (American alligator): 102570300
Entry
102570300         CDS       T03087                                 
Symbol
DHX15
Name
(RefSeq) DEAH-box helicase 15
  KO
K12820  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13]
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102570300 (DHX15)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amj03041]
    102570300 (DHX15)
   03009 Ribosome biogenesis [BR:amj03009]
    102570300 (DHX15)
Spliceosome [BR:amj03041]
 Complex A
  U2 snRNP components
   U2 related factors
    102570300 (DHX15)
 Complex B
    102570300 (DHX15)
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    102570300 (DHX15)
Ribosome biogenesis [BR:amj03009]
 Eukaryotic type
  90S particles
   Helicases
    102570300 (DHX15)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C HA2_N DEAD AAA_22 AAA_19 SRP54 nSTAND3 Flavi_DEAD AAA_29 AAA_25 DUF3915 Atrophin-1 Apis_Csd
Other DBs
NCBI-GeneID: 102570300
NCBI-ProteinID: XP_006260487
UniProt: A0A151PA01
Position
Un
AA seq 761 aa
MSKRHRLDLGDDYSSSKKRAASDGKDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLRPSN
AMVLTASGMQPLKPAVLPQGINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRHQ
SFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG
QEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMG
VLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEA
AIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPP
QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE
SLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL
KKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKM
VIASCDYNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAF
KQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALV
TGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIK
PEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgtccaagcgccaccgcctagacctgggggacgactacagttccagcaagaagcgcgcc
gcctccgacgggaaagatcgggatcgggatgatcgttctaaagaccgtgacagggatcgt
gacagagatagagatcgtgacagagaaagagataaggaaaaagatctacgtccatctaat
gctatggttcttactgcttcggggatgcaacctttaaaaccagcggtacttccacagggt
attaatccattcacaaacctaccacatacgcctcgatactatgacatcctgaagaaacgg
cttcaactccctgtctgggagtacaaggaaagattcacagatattctgattcgacaccag
tcttttgtcctggttggagagaccggatctggtaaaacaacacagatccctcaatggtgt
gttgaatatatgaggtcattacctggaccgaagagaggtgtcgcatgtacccagcctagg
agagtagctgcaatgagtgtggcacaacgagttgctgatgaaatggatgttatgttgggc
caggaggttggttactctattcgatttgaagactgcagtagtgcaaaaactattctgaag
tatatgactgatggtatgttacttcgtgaagctatgaatgaccctttgctggagcgctat
ggtgttataatacttgatgaggctcatgaaagaacactggctactgatattttgatggga
gttctgaaagaggttgtaaggcaaagagccgacttgaaggtcattgttatgagtgctact
ctagatgctggcaagtttcaaatttattttgataattgtcctctcctaactatccctggt
cgtacacatcctgtggagatcttttatactccagaaccagagagggattacctggaggct
gcaattcgaacagtgatccaaattcatatgtgtgaagaggaggaaggagatcttctacta
tttcttactggacaagaggagattgatgaagcctgtaagagaataaagcgtgaaattgat
gatttgggtcccgaagttggtgatatcaaaatcattccattgtattccactcttccacca
cagcagcaacaaaggatctttgagcctccccctccaaaaaaacaaaatggagcaatagga
agaaaggttgttgtatccactaatattgctgagacatcattaacgatagatggtgttgta
tttgtgattgatcctgggtttgctaagcaaaaggtgtacaatccccgcattagagtggag
tctcttttggtgactgccatcagtaaagcatctgctcagcagagagctggccgtgctggt
cgtactagaccaggcaagtgttttcgactgtatacagagaaagcctacaaaactgaaatg
caggacaacacctaccctgaaattctgaggtccaacttgggatctgtggtgttgcagctg
aagaaacttggtatagatgatttggtacactttgattttatggatcctccagctcctgaa
actctgatgagagccttagagcttttgaattatctggctgctttaaatgatgatggagac
ctaactgaattgggatctatgatggcagaatttccactggatccacaactggctaaaatg
gttattgcaagttgtgactacaactgctctaatgagatcctatctattactgccatgttg
tcagtcccacagtgttttgttcgccccacggaagccaagaaagcagcagatgaagccaag
atgaggtttgcccacatagatggagatcatttgactttgctgaatgtctaccatgctttc
aaacaaaatcatgagtcggttcagtggtgttatgacaacttcattaactacaggtccctg
atgtctgcagacaatgtacgccagcagctgtcacgaatcatggacagatttaatttgcct
cgtagaagcacagattttacaagcagagactattacatcaatataagaaaggctttggtt
actggttattttatgcaggtggcacatttggaacgaacagggcattacctaacagtgaaa
gacaaccaagtggtgcagttgcatccttccactgttcttgaccacaaacctgaatgggtg
ctttataatgaatttgtccttacgacaaagaactatatccggacatgtacagacatcaag
ccagaatggttggtgaaaattgcccctcaatattatgacatgagcaatttcccacagtgt
gaagcaaagagacagttggaccgcatcattgccaaacttcagtccaaggaatactcgcag
tactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (28)   

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