KEGG   Alligator mississippiensis (American alligator): 102570390
Entry
102570390         CDS       T03087                                 
Symbol
NR1H3
Name
(RefSeq) nuclear receptor subfamily 1 group H member 3
  KO
K08536  liver X receptor alpha
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03320  PPAR signaling pathway
amj04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:amj00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    102570390 (NR1H3)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    102570390 (NR1H3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amj03000]
    102570390 (NR1H3)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:amj03310]
    102570390 (NR1H3)
Transcription factors [BR:amj03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    102570390 (NR1H3)
Nuclear receptors [BR:amj03310]
 1. Thyroid hormone like
  1H. Liver X receptor like receptor
   102570390 (NR1H3)
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 102570390
NCBI-ProteinID: XP_006261463
UniProt: A0A151MB42
Position
Un
AA seq 408 aa
MGPTQLATQDHGKRVASVFEMEEGFSLFSSSENPSEHTENPPLKRKKGPAPKMLGNEVCS
VCGDKASGFHYNVLSCEGCKGFFRRSVIKGAQYICKNGGKCEMDMYMRRKCQECRLRKCQ
EAGMREQCVLSEEQIRLKKLKKQEDDQARTVVTRPNPPQTPSTSHKLTPEQLNMIDKLVA
AQQQCNRRSFTDRLKVTPWPQVPDPNNREARQQRFAHFTELAIISVQEIVDFAKQLPGFL
ELTREDQIALLKTSTIEVMLLETSRRYNPEIESITFLKDLSYNRDDFAKAGLQFEFINPI
FEFSKGMNDLQLNDAEYALLIAINIFSADRPNVQDQALVERLQHTYVEALHSYICINRPN
DHLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgggtcccacgcagctcgccacacaggatcatgggaagagggtggcaagtgtatttgag
atggaggaagggttttcacttttctctagttcagagaacccatcagagcatacagaaaat
ccacccctgaagcgaaagaaaggcccagcccccaagatgctgggaaatgaagtgtgcagt
gtgtgtggggacaaggcctctggctttcactacaacgtgctgagctgcgagggctgtaag
ggctttttccgccgcagtgtcatcaagggtgcccagtacatctgcaagaatggtggcaag
tgcgagatggacatgtacatgcgccgcaagtgccaggagtgccgtctacggaagtgccag
gaagcaggaatgcgggagcagtgtgttctgtctgaagagcagatccggctgaagaagctt
aagaaacaggaagatgatcaggcacggactgttgttacacgcccaaaccccccgcagacc
ccaagtacctcacacaaactgacccccgagcagttaaacatgatagacaagcttgtggca
gcacagcagcagtgtaaccggcgctccttcacagacagactcaaagtgacgccgtggcca
caagttccagaccctaataaccgtgaggcaaggcagcaacgttttgctcacttcacagag
cttgcaatcatctctgtgcaagagattgtggactttgccaagcagctgcctggtttcctg
gaactcaccagggaagatcagattgctctgctgaagacatccaccatagaggtgatgctg
ctggagacctctcggcgctacaatccagagatcgaaagcatcacctttcttaaagacctg
agttataatcgggatgatttcgccaaagcaggattgcagttcgagttcattaaccccatt
tttgagttttcaaagggaatgaatgatctacagctcaacgatgctgaatatgcactttta
attgccatcaacattttctctgcagaccgaccgaatgtgcaggaccaggccttggtggag
aggctgcagcatacctatgtagaggcccttcattcttacatttgtatcaacagaccaaat
gaccacctgatgttcccgcggatgttaatgaagttggtcagtcttcggactttaagcagc
gtccactctgagcaggtgtttgcccttcgattgcaggacaaaaagctccctcctttgctc
tctgaaatctgggatgtgcatgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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