KEGG   Alligator mississippiensis (American alligator): 106736888
Entry
106736888         CDS       T03087                                 
Symbol
KCNMA1
Name
(RefSeq) potassium calcium-activated channel subfamily M alpha 1
  KO
K04936  potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:amj00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    106736888 (KCNMA1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:amj04040]
    106736888 (KCNMA1)
Ion channels [BR:amj04040]
 Voltage-gated cation channels
  Potassium channel, calcium- and sodium-activated (KCa/KNa)
   106736888 (KCNMA1)
SSDB
Motif
Pfam: Slowpoke_C BK_channel_a Ion_trans Ion_trans_2 TrkA_N DUF6542
Other DBs
NCBI-GeneID: 106736888
NCBI-ProteinID: XP_019352720
Position
Un
AA seq 1094 aa
MTSTVEVTAPSLLLSTLGWEDHATGTAVGDFFQAPNQEAQKINGSGDTQADGTCKPTDEK
EETVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNPIESCQN
FYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSW
LGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPW
ENFQNNQPLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEII
ELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISP
NLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMR
VISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAPGL
STMLANLFSMRSCIKIEEDTWQKYYLEGVSNEMYTEYLSSAFVGLSFPAVCELVFAKLKL
LMIAIEYKSEKRESRSRKRILINPGNHVKIQEGTLGFFIASDAKEVKRAFFYCKACHDDI
TDPKRIKKCGCKRLEDEQPSTLSPKKKQRNGSMRNSPNSSPKLMRHDPLLIPGNEQIENM
DASVKKYDSTGMFHWCPGKDIEKVILTRSEAAMTVLSGHVVVCIFGDVNSALIGLRNLVM
PLRASNFHYHELKHIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDM
CVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNS
PVHGLLRQPSITTGINIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSV
LDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENALRGGYSTPQTLANRDRCRVAQ
LALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLNTPSQCTKRYVIANPPY
EFELMPTDLIFCLMQFDHNAGQSRASLSHSSHSSYSSSKKSSSAHSIPSTANRQNRSKTR
DSREKQKYVQEDRL
NT seq 3285 nt   +upstreamnt  +downstreamnt
atgaccagcactgtagaggtgactgcaccttctctcctcctctccacactgggatgggaa
gaccatgccacaggaacagcagttggagacttctttcaagctccaaatcaggaagcccag
aaaattaatggcagtggggacacccaggctgatggcacctgcaaacctacggatgaaaaa
gaagagactgtggcagcagaagtgggctggatgacctctgtaaaagactgggcaggagtg
atgatatctgcccagactttaactggcagagttcttgttgtcttagtcttcgctcttagt
attggtgctcttgtaatatacttcatagattcgtcaaacccaatagaatcctgccagaat
ttctacaaagatttcacattacagattgacatggctttcaacgtgttcttccttctctac
tttggcttgcgcttcatagcagccaatgacaagctgtggttttggctggaagttaactca
gtggtagatttcttcacagttcctccagtgtttgtgtcagtgtatttaaacagaagttgg
cttggtttaagatttttaagagcccttagactgatacagttttcagaaattttgcagttt
ctgaatatccttaaaacaagtaattccatcaagctggtaaatctgtgctctatatttatt
agtacgtggctgacagcagctgggttcatacatttggtggagaactcaggggatccatgg
gaaaatttccaaaataaccaaccgcttacatattgggaatgtgtttatttactaatggtt
actatgtccactgttggttatggagatgtttatgcaaaaacaacccttggtcgccttttc
atggtcttcttcatcctcgggggattggccatgtttgccagctacgtccctgaaatcata
gagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttagtggaagaaag
cacattgttgtctgtggtcacataacacttgaaagtgtgtcgaacttcttaaaggacttc
ctgcacaaggatagggatgatgtgaacgtggaaatcgtctttctgcataatatctcccct
aaccttgagctggaagctctttttaaacgacacttcactcaggtggaattttatcagggt
tcggttctcaatccacatgacctggcaagagtaaagatagagtcagcagatgcgtgccta
atccttgccaataaatattgcgctgacccagatgctgaagatgcctccaatattatgaga
gtaatttccataaagaattaccatccgaagataagaattatcactcagatgctgcagtat
cataacaaggctcatctgctaaatatcccaagctggaattggaaagaaggcgatgatgca
atatgtcttgctgaactcaagctgggtttcatagcccagagctgcctggcaccaggtctc
tcaacaatgttagccaacctcttctccatgaggtcatgcataaagattgaagaggataca
tggcagaaatactatctggaaggagtctcaaatgaaatgtatacagaatatctatctagt
gcctttgtgggtctgtccttccctgcagtttgtgagctggtgtttgcaaagctgaagctt
ttaatgatagccatagaatacaaatcggaaaaacgggaaagcagaagccgaaagcgcata
ttaatcaatccgggaaaccatgtcaagattcaagaaggtactttaggattcttcattgca
agtgatgccaaagaagtaaaaagggcatttttttactgcaaggcctgtcatgatgacatc
acagatcccaaaaggataaaaaaatgtggttgcaaacggcttgaagatgagcagccgtcg
acactgtcgcccaaaaaaaagcagcgaaatggaagcatgcgaaattcacccaactcctca
cccaaactgatgaggcatgaccccttgttaattcccggcaatgagcagatagagaacatg
gatgcaagcgtgaaaaaatacgactctacggggatgtttcattggtgtccaggcaaggac
attgaaaaggttattttgactcgaagtgaagcagcaatgacggttttaagtgggcacgta
gtcgtttgcatattcggggatgttaactctgcattgattggattaagaaatttagtgatg
ccattacgagccagcaactttcactatcatgaactcaaacacattgtgtttgtcggttcg
cttgagtatcttagaagggaatgggagacgctacataacttccccaaggtttcaatcttg
cctggtacgccattaagtcgggctgatttaagggctgtcaacatcaacctctgcgacatg
tgcgttatcctgtcagccaatcagaataatattgatgatgcttcgctgcaggacaaggaa
tgcatcttggcgtcactcaacatcaaatctatgcagtttgatgacagcattggggtcttg
caggctaattcccaagggtttacgccaccagggatggataggtcatctccagacaatagt
ccagtccatggcctgttacgtcagccctccatcacaacaggaatcaatatccctattata
acagagctagtaaatgattcaaatgttcagtttttggaccaagatgatgacgatgacccc
gacacagaactgtatctcacacagccgtttgcctgtggaactgcatttgctgtcagcgta
ctggattctctcatgagtgcaacatacttcaatgacaatatcctcacgctgatacggaca
ctggtaacaggaggagccacaccagagctggaagctctgatcgctgaggagaacgcactg
agaggagggtacagcacacctcagacgcttgcaaacagggacaggtgtcgagttgcacag
ctggctttgtacgatgggccttttgcagacctaggggatggtggttgttatggagacctg
ttttgtaaagcgttgaaaacatacaatatgctttgctttggaatttaccgattgcgggat
gcacatctaaatacacccagccaatgcactaaacgttatgttattgcaaaccctccttat
gagtttgaactcatgccgacagacttgatcttctgcttgatgcagtttgaccacaacgcc
ggccaatcccgggccagtctctcgcattcctcccattcctcatactcttccagcaagaag
agttcatcagcgcactccatcccctcaacggcaaaccgacagaaccgctctaagaccaga
gactcccgggaaaaacagaagtacgtgcaggaagatagactgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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