KEGG T03087: 106737254

Alligator mississippiensis (American alligator): 106737254

Entry

106737254         CDS       T03087

Symbol

ARHGEF1

Name

(RefSeq) Rho guanine nucleotide exchange factor 1

K12330

Rho guanine nucleotide exchange factor 1

Organism

amj Alligator mississippiensis (American alligator)

Pathway

amj04270

Vascular smooth muscle contraction

amj04810

Regulation of actin cytoskeleton

Brite

KEGG Orthology (KO) [BR:amj00001]
09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    106737254 (ARHGEF1)
09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    106737254 (ARHGEF1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amj04131]
    106737254 (ARHGEF1)
Membrane trafficking [BR:amj04131]
Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    106737254 (ARHGEF1)

SSDB

Motif

Pfam:

RGS-like PH_16 RhoGEF PH_13

Other DBs

NCBI-GeneID:

106737254

NCBI-ProteinID:

XP_019339276

Position

AA seq 1053 aa
MEEEPQGLGPGGCSQAPPAIIGAEDEDFENDLKQTPDDQSSLFGSLELLRTHPAYLMAFL
LHAVLQFDPSPVLCFLHAELLRSLGAKEAKKQFVDFYHSFIDKTGLLRVPIPEQVQFELD
RTRPELLPDDIQRQFLAEIQSAQEPEITRQLEVFRSNRQMGMTPGAAELGELESYQTRDK
SIREAKEKQLAETLLVRLEDMQSTISTDEERSLAIFASIAAYMKHLGVKTRTGDSKKSKG
HFFRKKISGNRKLEEPPRRRGFGILDAAAARWARDTPNPDPRPSKGPEGEADKAAVPDRK
GLKVVEVGTQRSRGAAVGAPGPDPPSLAVTISTPPAEGPEGDAGSEAPKTTDMLDVSPKR
GDTVEPPTSDTQPPEEAVECERRRIRLPGRLGRSESLRAVERRRSQRGSAKGKPPRSRSD
VDLDAAARAGALAAPPGTPGRCVLEPGEPPPFLSVQPEEGAEPRPAPGPELPEPEPPGTW
RQLVAPDTLLRLQPTEVKRQEVINELFMTEFAHVRMLRVLLEVFYQPLLADSFLAEDELV
AMFPGLEDLLEVHGLFLESLRELRDDNNYVVPEIGDVLLARFEGTEGGWFEKISARFCSC
QSHTLKQLKAKQRRDPRFAQFIQEAESQARCRRLQLKDIVPIEMQRLTKYPLLLQNIAKY
TEAPEERARVEHAAECCRHILHRVNQEVRDMENFMKMKDYQGRLDLSYMKQSSDPLLSDF
KVSDITKRHLVHEGLLTWRVSKDKAVEVQALLLDDLLVLLQRQEERLVLRCQSRPVSALD
TAKLSLSPIVRLSSAITRQVATDRKAFYVISSCEKAPQIYELVAQTVSEMKSWCSLIDKT
AGSIKLPESSSVKHSRPGQNPPSPSYCREPLLSTSENGASLKETDERDKDRALEGAEFEE
CSPVPHPHNDTPALAALLALARPLGGAEGALAATALQRVSALRRLLLGEGDVAPPTPPPQ
AGAEAEEAPGERDPGDGAEGSEAAPGGSLNGPRPPARGGPGTPPPLPSRLAALARDELQP
LELTLHALRNLEEEFWLLQGALAKCGPPAPGFT

NT seq 3162 nt +upstreamnt +downstreamnt
atggaggaggagccgcagggcttgggcccggggggctgcagccaggcaccgcccgccatt
attggggctgaggatgaggattttgagaatgacttgaagcagaccccggatgaccagagc
agcctgttcgggagcctggagctgctgcgcacgcacccagcctatctcatggcttttctg
ctgcatgccgtgctccagttcgaccccagtcctgtgctctgtttcctccatgcagagctg
ctgcgcagccttggcgccaaagaagcgaagaagcagtttgtggatttctatcacagcttc
atcgacaagaccgggctcctgcgggtccccatcccggaacaggtgcagtttgagctcgac
cggacccggccagaactgctgcccgatgacatccaacgccagttcctggcagaaatccag
tccgcccaggagcccgagatcacccggcagctcgaagtcttcaggtcaaatcggcaaatg
ggcatgacccctggagcagctgagctgggggagctggagtcatatcagacccgggacaag
agcatccgggaggctaaagagaagcagctggcggagacgctgctagtgcggctggaggac
atgcaatccacaatctccacggacgaggagcgcagcttggccatcttcgcctccattgcc
gcctacatgaagcatctgggagtgaagacccgcactggtgacagcaagaaatccaagggg
cacttcttccgcaagaagatttcgggcaaccggaagttggaggagccaccgcggcgccgg
ggctttgggatcctggatgcagcagcagcacgctgggcccgagacacccccaaccccgac
cccaggcccagcaaaggccccgagggcgaagcggataaggcagccgtgccggacaggaag
gggctgaaggtggttgaggtggggacacagcggagccggggggctgcagtgggggcccca
gggcctgacccccccagcttggccgtgaccatcagcacccccccagctgaggggcctgag
ggggatgcaggctcggaggcccccaaaaccacagacatgttggatgtgagccccaagagg
ggggacacagtggagccccccaccagtgacacgcagccccccgaggaggctgttgaatgc
gagagacgccgtatcaggctgccgggacggctgggccgttcggagagcctgcgggcagtg
gagcggcgccggtcccaacgtggctcagccaaggggaagccaccacgctcccgcagcgac
gtggacctggacgcggctgcccgcgccggtgccctcgcggcccccccgggcacccccggc
cgctgcgtcctggagccaggggagccaccgccctttctgtctgtgcagcctgaggagggt
gctgagccgcgccctgcgccagggccagagctgcctgaaccggagccgccgggcacctgg
cgccaactcgtggcccctgacaccctcctccggctgcagcccaccgaggtcaagcgccag
gaggtcatcaacgagttgtttatgacggagtttgcacacgtgcggatgctgcgggtcctg
ctggaggttttctaccagccactgcttgctgacagcttccttgcagaggatgagcttgtt
gccatgtttcccggcctggaggacctgctcgaggtgcacggtcttttccttgagagcctg
cgggaactgcgggatgacaacaactacgtcgtccctgagattggggatgtgctcctggcc
cggttcgagggcacggagggtggctggttcgagaagatttcagcacggttctgcagctgc
cagtcccacaccctgaagcagctcaaggctaagcaacgccgggacccacgctttgcacag
ttcatccaggaggcggagagccaggcacgctgccggcggctgcagctgaaggacattgta
cccattgagatgcaacgactcaccaagtacccgctgctgctgcagaacatcgccaagtac
actgaggcaccagaggagcgggcacgggtggagcatgcagctgagtgctgccgtcacatc
ctgcaccgcgtcaaccaggaggtgcgcgacatggagaacttcatgaagatgaaggactac
cagggccgcctggacctgtcctacatgaagcagagctcagacccactgctcagcgacttc
aaggtgtccgacattaccaagcggcacctggtgcacgaggggttgctgacctggcgcgtc
tccaaggacaaggctgtggaggtgcaggcgctgctgctggacgatctgctggtgctgctg
cagcggcaggaggagcgcctggtgctgcgctgccagagccgcccggtcagcgccctcgac
accgccaagctcagcctcagccccatcgtgcggctcagctccgccatcacgcgccaggta
gccacagaccgcaaggccttttacgtcatcagcagctgtgagaaggcaccacagatctac
gagctggtggcacagacggtgtcggagatgaagagctggtgctcgctgatcgacaagacg
gctgggagcatcaaactgcccgagtccagttcggtgaaacattctcggcctggacagaac
ccgcccagccccagctactgccgggagccgctgctcagcacctctgagaatggggcgtca
ctgaaggagacagacgagcgcgacaaggacagggcactggagggggctgagtttgaggag
tgcagccctgtgccccacccccacaacgatacccctgccctggccgcgctgctggccctg
gcgcggcccctggggggtgccgaaggggcgctggcggccaccgcattgcaaagagtgtca
gcgctgcggcggctgctgctgggggagggcgatgtggccccccccacgccccctccccag
gccggagcggaggctgaggaggcaccaggtgagcgggacccaggcgatggcgccgagggc
tcggaggcggctccaggggggtccctgaatggcccccggcctccggcccgggggggccct
ggcacccccccaccgctgccctcccgcctggctgcgctggcccgggacgagctgcagccc
ctggagctcacgctgcatgcgctcaggaacttggaggaagagttctggctgctccagggg
gctctggccaagtgcggcccccccgcacctggcttcacgtga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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