KEGG   Alligator mississippiensis (American alligator): 106737441
Entry
106737441         CDS       T03087                                 
Name
(RefSeq) thrombospondin-3
  KO
K04659  thrombospondin 2/3/4/5
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04145  Phagosome
amj04510  Focal adhesion
amj04512  ECM-receptor interaction
amj04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106737441
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    106737441
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106737441
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106737441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amj04131]
    106737441
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amj04147]
    106737441
   00536 Glycosaminoglycan binding proteins [BR:amj00536]
    106737441
Membrane trafficking [BR:amj04131]
 Endocytosis
  Phagocytosis
   Opsonins
    106737441
Exosome [BR:amj04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   106737441
  Exosomal proteins of colorectal cancer cells
   106737441
  Exosomal proteins of bladder cancer cells
   106737441
Glycosaminoglycan binding proteins [BR:amj00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   106737441
SSDB
Motif
Pfam: TSP_C TSP_3
Other DBs
NCBI-GeneID: 106737441
NCBI-ProteinID: XP_014453277
Position
Un
AA seq 405 aa
GSRWGWAWAGVTIAVLPTGIPNVLDNCPKVPNPLQTDRDEDGVGDACDSCPEMSNPTQTD
MDSDLVGDICDTNEDSDGDGHQDSKDNCAEVPNSSQLDSDNDGLGDDCDNDDDNDGIPDY
IAPGPDNCRLIPNPNQKDSDGNGVGDVCEEDFDNDTVADQLDVCPESAEVTLTDFRAYQT
VILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDY
AGFIFSYQDSSSFYVVMWKQTEQTYWQATPFRAVAETGLQLKAVKSTTGPGEHLRNALWH
AGTTPDQVRLLWKDPRNVGWKDKTSYRWQLMHRPQVGYIRVRLYEGPRLVADSGVILDST
MRGGRLGVFCFSQENIIWSNLQYRCNDTVPQDFEPFRPLLLEGRE
NT seq 1218 nt   +upstreamnt  +downstreamnt
ggctcaaggtggggctgggcttgggctggggtcaccattgctgtgctgcccacagggatc
cccaatgtgctggacaactgccctaaggtccccaacccactgcagacagaccgggatgag
gatggcgttggggatgcctgcgacagctgccctgagatgagcaaccccactcagacagac
atggacagtgacctggtaggagacatctgtgacaccaatgaggacagtgatggggatggg
caccaggactccaaggacaactgtgccgaagtgcccaacagctcccagctggactcagac
aacgacgggctgggggatgactgtgacaatgatgacgacaacgatggcatccctgactac
attgctcctggccctgacaactgccgccttattcccaaccccaaccagaaggactcagat
gggaacggggtgggtgatgtctgtgaggaggatttcgataatgacacagtggctgaccag
ctggacgtgtgcccggagagtgccgaggtgacgctgactgacttccgggcctaccagaca
gtgatcctggaccccgagggcgatgcccagatcgaccccaactgggtggttctgaaccag
ggcatggagattgtacagaccatgaacagtgacccgggcctggctgttggctacacggcc
ttcaacggggtggacttcgagggcaccttccatgtcaacactgtcacggatgatgactac
gctggcttcatcttcagctaccaggacagctccagtttctacgtggtcatgtggaagcag
acagagcagacgtactggcaggctacccccttccgggccgtggctgagaccgggctgcaa
ctcaaggcggtgaagtccacgacgggccccggcgagcacctgcgaaacgcgctgtggcat
gcaggcaccaccccggaccaggtccggctgctgtggaaggatccgcgcaacgtgggctgg
aaggacaagacctcgtaccggtggcagctcatgcacaggccccaggtgggctacatccgg
gtgcggctgtacgagggcccgcggctggtggcggactcgggcgtgatcctcgacagcacg
atgcggggcggccgcctgggcgtcttctgcttctcccaggagaacatcatctggtccaac
ctgcagtaccgctgcaacgacacggtcccgcaggacttcgagcccttccgcccgctgctg
ctcgagggccgcgagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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