KEGG   Ailuropoda melanoleuca (giant panda): 100464514
Entry
100464514         CDS       T01329                                 
Symbol
RNF8
Name
(RefSeq) E3 ubiquitin-protein ligase RNF8 isoform X1
  KO
K10667  E3 ubiquitin-protein ligase RNF8 [EC:2.3.2.27]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aml04121]
    100464514 (RNF8)
   03400 DNA repair and recombination proteins [BR:aml03400]
    100464514 (RNF8)
Enzymes [BR:aml01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100464514 (RNF8)
Ubiquitin system [BR:aml04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100464514 (RNF8)
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     100464514 (RNF8)
SSDB
Motif
Pfam: FHA zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-rbx1 zf-RING_UBOX zf-C3HC4_4 zf-RING_5 Yop-YscD_cpl Prok-RING_4 zf-ANAPC11 zf-RING_6 zf-RING_10 DUF6594 AAA_11 DUF4407 Golgin_A5
Other DBs
NCBI-GeneID: 100464514
NCBI-ProteinID: XP_011230415
Ensembl: ENSAMEG00000015391
UniProt: G1MA53
Position
5:32053406..32085755
AA seq 491 aa
MEEPGLLVTGDRARGRSWCLRRVGMNAEWLVLEEGNEVTIGRGFGVTYQLVSKICPLMIS
RNHCVLKQNVQGQWTIMDNKSLNGVWLNRERLEPLKVYSIHKGDHIQLGVPLENKEKAEY
EYEVAEEDRERMYPCLAPKNDQMTGKNRGLRTKRKFSLDELEGPGAEGPSTLKSKMSKVS
CEPGQPVKSHWKGEAASQPSEYLDPKWTSLEPKEKATEARVHPGFAKVIELHHKKQKASN
PTACQSSLELFKVTMSRILKLKTQMQEKQVDVLKVKKQTQKGNSKKIVKMEQELQDLQSQ
LCAEQAQQQARVEQLEKTFQEEEQHLQGWEKEQGEEDLKQQLAQALQEHQALTEELNRSK
KDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNC
AHSFCSYCINEWMKRKVECPICRKDIKSKTHSLVLDNCINKMVDNLSSEVKERRIVLTRE
RKGCEQAKRLS
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggaggagcccggcttgttggtcacgggagaccgcgcccgtggccggagctggtgcttg
cggcgggtagggatgaacgccgagtggctggtgctggaggaaggaaacgaggtgactata
gggcgaggatttggtgtcacataccaactggtatcaaaaatctgccctctgatgatttcc
cgaaaccattgtgttttgaagcagaatgtccagggccagtggacaattatggacaacaag
agtctgaatggtgtttggctgaacagagaacgtctagaacctttaaaggtgtattctatc
cataagggagaccacatccagcttggggtgcctctggagaataaggagaaggcagagtat
gaatatgaagttgctgaagaagaccgggagaggatgtacccttgtctcgccccaaagaat
gaccagatgacgggaaaaaacaggggattgagaactaaacggaaatttagtttggatgaa
ttagagggtcctggagctgaaggcccctcaactttgaaatccaaaatgagtaaagtgtct
tgtgaacctggtcaaccagtgaagtctcattggaaaggtgaagcggccagtcaaccctct
gaatatttggatcctaagtggacttctcttgagccaaaggagaaggccacagaggctcgt
gttcaccctggcttcgcaaaagtcatagagcttcatcataagaagcagaaagcctcaaac
cctacagcatgtcagagcagcttagagctattcaaggtgaccatgtccaggattctgaag
ctgaaaacacaaatgcaggaaaaacaggtagatgtcctgaaggtgaaaaagcagactcaa
aaagggaactcaaagaaaattgtgaaaatggagcaggagctgcaggacttacagtcccag
ctgtgtgcagagcaggcccagcagcaggccagagtggagcagctggagaagactttccag
gaagaggaacagcatctccagggttgggagaaggagcaaggagaagaggacctgaagcag
cagctggcccaggccctgcaggagcatcaggctctaacggaagagctaaatcgcagcaag
aaggactttgaagcaatcattcaagccaagaacaaagaactggaacagaccaaggaagag
aaggagaaggtgcaagcacagaaggaggaagtgcttagccacatgaatgacgtgctggag
aatgagctccagtgtattatttgctccgaatacttcattgaggctgtcaccttgaactgt
gcccacagtttctgctcctactgtatcaatgagtggatgaagcggaaggtagaatgcccc
atttgtcggaaggacatcaagtccaaaacccactccctggttctggacaattgcattaat
aagatggtagataatctgagctcagaagtgaaagaacgacgaatcgtcctcactagggaa
cgaaaaggttgtgaacaagcaaagagactgtcctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (18)   
   Pfam (18)   
All databases (42)   

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