KEGG   Ailuropoda melanoleuca (giant panda): 100465344
Entry
100465344         CDS       T01329                                 
Name
(RefSeq) keratin, type II cytoskeletal 2 epidermal
  KO
K07605  type II keratin, basic
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:aml04812]
    100465344
   04147 Exosome [BR:aml04147]
    100465344
Cytoskeleton proteins [BR:aml04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Types I and II: Acidic and basic keratins
     100465344
Exosome [BR:aml04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   100465344
  Exosomal proteins of other body fluids (saliva and urine)
   100465344
  Exosomal proteins of colorectal cancer cells
   100465344
  Exosomal proteins of bladder cancer cells
   100465344
SSDB
Motif
Pfam: Filament Keratin_2_head Vps53_N TPR_MLP1_2 FlgN CENP-F_leu_zip Nuf2_DHR10-like DUF4407 SlyX T7SS_ESX_EspC DUF1192 DUF745 COG6_N ADIP DUF948
Other DBs
NCBI-GeneID: 100465344
NCBI-ProteinID: XP_002923291
Position
16:complement(42288955..42296791)
AA seq 664 aa
MSCQISCRSRRGGGGFRGFSSGSAVVSGGSRRSASSFSCLSRHGGGGGGYGGGSFGSRSL
VGLGGTKSISISVAGGGGSFGAGAGFGGRGGGFGGGSGFGGGGFGGGGFGGGRFGGGGGF
GGFGGLGGIGPGGFPGGGIHEVSINQSLLQPLNVKVDPEIQNVKAQEREQIKTLNNKFAS
FIDKVRFLEQQNQVLQTKWELLQQLDVGTRTTNLEPIFQAYIAKLKTYVDTLSAERTSQD
SELNNMQDLVEDFKKKYEDEINKRTAAENDFVTLKKDVDNTYMAKVELQAKTDVLTQEIE
FFKFLFDAELSQIRQTITDTNVILSMDNNRSLDLDSIISEVRAQYEEIAQKSKDEAEALY
HSKYEELQVTAGKHGDSLKEVKMEISELNRVIQRLQGEIAHVKKQCKSVQEAIADAEQKG
EHALKDAQSKLSDLEDALQQAREDLARLLRDYQELLNVKLALDVEIATYRKLLEGEECRM
SGDLSSNVTVSVTSSTISSSASSKGGFGGYGSGGKGAGSGGGGYSSRSGSYSSGGRGSSS
RGGGGGGYGSGGGSRGGSVSGGGYSSGGGSRGDSVSGGGYSSGGGSRGGSVSGGGYSSGG
GSRGDSVSGGGYGSGGGSRGGSGSGGGSGGAYGSGGGSRGSSSSEKGGSGSGEAYGSSVT
FSFR
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgagttgtcagatctcgtgcagatctcgaagaggaggaggagggttccggggcttcagc
agcggctcggccgtggtctccggtgggagccggagatcggcctctagcttctcctgcttg
agccgccatggtggtggcggagggggctacggcggcggcagctttggcagtcggagcctt
gtcggcctcggaggcaccaagagcatctctattagcgtggctggaggaggtggaagcttt
ggcgccggtgctggatttggtggcagaggcggtggctttggaggcggcagtggcttcggt
ggaggtggctttggaggcggtggctttggcggaggccgctttggaggtggcggtggcttt
ggaggttttgggggtcttggcggcattgggcctggaggattccctggcggaggcatccac
gaggtctccatcaaccagagcctcctgcagcctctcaacgtgaaagtggacccagagatc
cagaatgtgaaggctcaggagcgggagcagatcaaaacgctcaacaacaaatttgcttct
ttcatcgacaaggtgcggttcctggagcagcagaaccaggtgctgcagaccaagtgggag
ctgctgcagcagctggacgtgggcacccgcaccaccaacctggagcccatcttccaagcg
tacattgccaaactgaagacgtacgtggatacgctgtctgcagaacggacatcccaagat
tcagagctgaacaacatgcaggatcttgttgaggattttaagaagaagtacgaggatgaa
atcaacaagcgcacagctgccgagaatgattttgtgacccttaaaaaggatgtggacaat
acctacatggccaaggtggagctacaggccaagacggacgtgctgacccaggagattgag
ttctttaaattcctgtttgatgcggagctgtcccagatccggcagactatcaccgacacc
aacgtcatcttgtccatggacaacaaccgcagcctggacctggacagcatcatctccgag
gtccgcgcccagtacgaggagattgcccagaagagcaaggacgaggccgaggcgctgtac
cacagcaagtatgaagagctccaggtgaccgcagggaaacacggagacagcctgaaggag
gtcaagatggagatcagcgagctgaaccgcgtgatccagaggctgcaaggggagatcgcc
cacgtgaagaagcagtgtaagagtgtgcaagaagccattgcggatgctgagcagaaggga
gagcatgccctcaaagatgcccagagcaagctctcggacctggaggacgccctgcagcag
gcccgggaggacctggcccggctgctgcgcgactaccaggagctcctgaacgtcaagctg
gccctggatgtggagatcgccacctaccgcaagctgctggagggcgaggagtgcaggatg
tccggagacctcagtagcaatgtgactgtgtctgtgaccagcagcaccatatcttcgagc
gcatcatccaagggcggctttggaggctatgggtctggaggtaaaggagccggttctgga
ggaggaggctacagctccagaagtggcagttacagctctggaggcaggggctcaagctcc
agagggggcggtggagggggctacggctccggcggcggctccagagggggttccgtctct
gggggaggatacagctccggaggcggctccagaggggattccgtctctgggggaggatac
agctccggcggcggctccagagggggttccgtctctgggggaggatacagctccggcggc
ggctccagaggggattccgtctctgggggaggatacggctccggcggcggctccagagga
ggctctggctctgggggaggctctggaggggcatatggctctggaggcggctctagaggc
agttccagctcagaaaagggtggttctggctcaggtgaagcttatggttccagtgtgacc
ttctcttttagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (37)   

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