KEGG   Ailuropoda melanoleuca (giant panda): 100466808
Entry
100466808         CDS       T01329                                 
Symbol
HTT
Name
(RefSeq) huntingtin
  KO
K04533  huntingtin
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml05016  Huntington disease
aml05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:aml00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100466808 (HTT)
   05022 Pathways of neurodegeneration - multiple diseases
    100466808 (HTT)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100466808 (HTT)
   04131 Membrane trafficking [BR:aml04131]
    100466808 (HTT)
   03029 Mitochondrial biogenesis [BR:aml03029]
    100466808 (HTT)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100466808 (HTT)
Membrane trafficking [BR:aml04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    100466808 (HTT)
Mitochondrial biogenesis [BR:aml03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    100466808 (HTT)
SSDB
Motif
Pfam: Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT HEAT_2
Other DBs
NCBI-GeneID: 100466808
NCBI-ProteinID: XP_034528082
Ensembl: ENSAMEG00000014658
Position
11:complement(108349690..108484012)
AA seq 3018 aa
MELFLLCSDDAESDVRMVADECLNRVIKALMDSSLPRLQLELYKEIKKNGAPRSLRAALW
RFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAVPKIMASFGNFANDNEI
KVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYNWLLNVLLGLLVPVEGEHST
LLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKELEVSPSTEQLIQVYELTLHYTQHQ
DHNAVTGALELLQQLFRTPPPELLQALSTPGGGPLAAAHRQPGCRSRSGSIVELLAGGGS
SCSPVLSRKQKGKVLFGEAAALEDDSESRSEGSSPAFAASVKGEIGGELAASSGVSTPGS
ASSAADSVGHDIITEQPRSQHTLQPDSADLTGCDLASAATDGDEEDILSHSSSQISAVPS
DPAMDLNDGTQASSPVSDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYSGIQIGQPQDED
EEATGIHPDEDADAFRNSSVALQQAHLLKSMGHSRQPSDSSVDKFVSRDEAAEPGDQENK
PCRIKGDIGQSTDDDSVPLVHCVRLLSASFLLTGEKNVLVPDRDVRVSVKALALSCVGAA
VALHPESFFSKLYKVPLDTMVYPEEQYVSDILSYIDHGDPQVRGATAVLCGTLISSILSR
SRFQVGDWMGTVRALTGNTFSLADCIPLLQKTLKDESSVTCKLACTAVRHCVMSLCSSSY
SELGLQLITDVLTLRESSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGAHHYTGLLK
LQERVLHDVVIHLLGDEDPRVRHVAAAALMRLVPKLFYKCDQGQADPVVAVARDQSSVYL
KLLMHEAQPPSHFSVSTVTRIYRGYNLLPSMTDVTVENNLSRVIAAVSRELVTSTTRALT
FGCCEALCLLSAAFPVCIWSLGWHCGVPPLSASDESRKSCTVGMATMILTLLSSAWFPLD
LSAHQDALVLAGNLLAASAPKSLRSSWTSEEEANPAAAKQEEVWPALGDRTLVPMVEQLF
SHLLKVINICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEPASVPLSPKK
GSEASPASRQSDAPGPVTANKSSSLGSFCHLPSYLKLHDVLKATHANYKVTLDLQNSTEK
FGGFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPVMATVCVQQLLKTLFGT
NLASQFDGLSSNPSKSQGRAQRLGSSSVRPGLYHCCFMAPYTHFTQALADASLRNMVQAE
QDHDTSGWFDVLQKVSTQLKTNLTSATKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSV
QLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLV
LLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGK
ELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMLARQQ
MHIDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPDTMASVSTVQLWISGILAILRV
LISQSTEDIVLSRIQELSFSPYLISCPIINRLRDGDSTSTPEEHNEGRQIKSLPEETFSR
FLLQLVGILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASRL
FTVDNADGSFYGLERLNARVRAMVPTHPALVLLWCQILLLVSHTDYRWWAEVQQTPRRRS
LSSTKSLSPQMPGEEEGPDAACKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVN
HIQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSAPTALKKTLQCLEGIHL
SQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAANLQSSTAQLPVEELSRIQEY
LQSSGLAQRHQRLYSLLDRLRLATAPGSRGPSPPVTSHPLDGDGPLALETVIPDKDWYLR
LVKSQCWTRSDSALLEGAELVNRIPPSDMSTFMMNSEFNLSLLAPCLGLGMREISGGQRS
PLFEAARLATLDRVTGLVQQLPAAHHVFQPFLPVEPTAYWSKLNDLFGDAVLYRSLTTLA
RALAQYLLVFSKLPSHLHLPPEKERDTVKFVVMTLEALAWHLIHEQIPLSLDLQAGLDCC
CLALQLPSLWSVLSSPEMVTHACSLIHCVRFVLEAVVVQPGDQLLSPERRRNTPKASRED
EVDSNTQNPAYITAACGMAAEMVESLPSVLALGHKRNSSTPAFLTSVLRNIIISLARLPL
VNSYTRVPPLVWRLGWSPKPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINVLGWTSRTQF
EETWATLLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPAV
SCLEQQPRNKPLKALDTRFGRKLSVIRGIVEQEIQAMVSKRENVATHHLYQAWDPVPSLS
PATTGALISHDKLLLQINPERELGNMSYKLGQVSIHSVWLGNSITPLREEEWEEEEEEEA
DVPVPASPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSGSARRTPIILISEVVRSL
LVVSDLFTERTQFEMMYLALTELRRVHPAEDEILAQYLVPATCKAAAVLGMDKAVAEPVS
RLLESTLRSSHLPSKVGALHGALYVLECDLLDETAKQLVPVISDYLLSNLKGVAHCVNIH
SQQHVLVMCATAFYLIENYPLDVGPEFSASVIQMCGVMLSGSEESTPSIIYHCVLRGLER
LLLSEQLCRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKISPGRSSDPSPA
APDSESVIVAMERVSVLFDRVRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSN
QQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRTPVAMAVWSLSCFFVSAS
TSPWVSAVLPHVISRMGKLEQVDVNLFCLVATDFYRHQIEEELDRRAFQSVFEVVAAPGN
PYHRLLTCLRNVHKVATC
NT seq 9057 nt   +upstreamnt  +downstreamnt
atggaactttttctgctgtgcagtgatgacgcagagtcggatgtccggatggtggctgac
gagtgcctcaacagagtcataaaagcgctgatggactccagtcttccgaggttacagtta
gaactctataaggaaatcaaaaagaacggtgctccccgcagcctgcgcgctgccctgtgg
aggtttgctgagctggctcacctggtccggcctcagaagtgcaggccttacttggtaaac
cttttgccttgcctgactcgaataagcaagagacctgaggaatctgttcaggagaccttg
gctgcagctgtacccaaaattatggcttcttttggcaattttgcaaatgacaatgaaatt
aaggttctattaaaggctttcatagcgaatctgaagtcaagctccccgaccattcggcgg
acggcggctggctcagcagtgagcatctgccagcactcgagaaggacgcagtacttttac
aattggctactaaatgtgctcttaggcttgctggtccctgttgagggtgaacactccacc
ctcctgattcttggagtgctgctcacgctgaggtacctggtgcccttgctgcagcagcag
gtcaaggacacgagcctgaaaggcagctttggggtgacacggaaagaactggaagtctcc
ccctcgacagaacagctcatccaggtttatgaactgaccttgcactatactcagcaccaa
gaccacaacgctgtgaccggggcgctggagctcctgcagcagctgttcaggacgccccca
cccgagctcctgcaggccctgagcacgccgggcggcgggcccctcgctgccgcacaccgc
cagcctgggtgccggagccgcagcggcagtatcgtggagctgctagctggagggggttct
tcatgcagccctgtcctttcaaggaaacaaaaagggaaagtgctcttcggagaagcagca
gccttggaggacgactctgagtccaggtcggagggcagcagccctgcctttgcagcctca
gtcaagggtgagattggtggcgagctggctgcctcttccggggtctccactcctggctct
gccagttcagctgccgactccgtggggcacgacatcatcaccgagcagccccggtcccag
cacacgctgcagccagactcggcggatctgaccggctgtgacctggccagtgctgccacc
gacggggacgaggaggacatcttgagccacagctctagccagatcagtgccgtcccgtcc
gacccggccatggacctgaacgatggcacccaggcctcctccccagtgagcgacagctcc
cagaccaccactgaagggcctgattcagccgtgaccccttcagacagttctgaaattgtg
ttagatggtgccgacagccagtattcggggatacagatcggacagccgcaggacgaggat
gaggaagccacgggcattcacccggatgaagacgcagatgcgttcagaaactcttcagtt
gcccttcagcaagcacatttattgaaaagcatgggccacagcaggcagccctctgacagc
agtgtagataaatttgtctccagagatgaagctgctgaaccaggagatcaagaaaacaag
ccttgccggatcaaaggtgacataggacagtctactgatgatgattctgtccctcttgtg
cattgtgtccgccttctatctgcttcgtttttgctgaccggggaaaaaaatgtattggtt
ccggacagggacgtgagggtcagtgtgaaggcgctggcactcagctgtgtgggagctgct
gtggcccttcatcctgaatctttcttcagcaaactttataaagtacctcttgacaccatg
gtataccctgaggagcagtacgtgtcagacatcctgagctacatcgatcacggagacccc
caggtcagaggagccacggccgttctgtgtgggaccctcatctcctccatcctcagcagg
tcccgcttccaagtgggagactggatgggcaccgtcagggccctgacaggaaatacattt
tctctggcggactgcattcctttgctgcagaaaactttgaaggatgaatcttctgtgact
tgcaagttggcttgtacagctgtgaggcactgtgtcatgagtctctgcagcagtagctat
agtgagctgggactacagctcatcaccgacgtgctgaccctgagggaaagttcctactgg
ctggtgagaacggagcttttggagactcttgcagagattgattttaggttggtgagcttt
ttggaggcaaaagcagaaaacctgcacagaggggcccatcattacacagggcttttaaaa
ctgcaagaacgcgtgctccatgatgtcgtcatccatctgctcggggacgaggaccccagg
gtgcggcacgttgctgcagcggcactgatgaggcttgtcccgaagctgttttataagtgt
gaccaaggacaagctgaccccgtcgtggctgtggcgagagaccaaagcagtgtctacctg
aagctcctcatgcacgaggcacagcctccatctcacttctccgtcagcaccgtcaccaga
atatacagaggctataacttactaccgagcatgacggatgtcaccgtggaaaacaacctc
tctcgggtcattgcggcggtttcccgcgaactggtcacatccaccacccgcgcgctcaca
tttggatgctgcgaagctctgtgtcttctttcagccgccttccccgtctgcatttggagt
ttaggttggcattgtggggtgcccccactgagcgcctccgatgagtcgagaaagagctgt
actgtaggcatggccacgatgatccttaccctgctctcctcagcttggttcccgctggat
ctctcagcccatcaggatgctttggttttagccgggaacttgctcgcagccagtgccccc
aaatctctcagaagttcatggacctctgaagaagaggccaacccagcagccgccaagcag
gaagaggtctggccagctctgggtgaccggaccctggtgcccatggtggagcagctcttt
tcccacctgctgaaggtgattaatatctgtgctcacgtcttggatgatgtggctcccgga
ccagcaataaaggcagccttgccgtctctgacaaaccctccttctctaagtcccatccga
cggaagggaaaggagaaagaacccggagagccggcctctgtgcccttgagccccaagaaa
ggcagtgaagccagtccagcctctcgacaatctgacgccccagggcctgttacagcaaat
aagtcctcgtcgctggggagtttctgtcaccttccttcgtacctcaaattgcacgatgtc
ctgaaagctactcacgccaactacaaggttaccttggatcttcagaacagcaccgaaaag
tttgggggctttctgcgctctgccttggatgttctctctcagatcctagagctggcgacg
ctgcaggacatcgggaagtgtgtggaggagatcctcgggtatctgaagtcttgtttcagt
cgagaaccagtgatggcaactgtctgcgtccagcagctgttgaagactctcttcgggacg
aacttggcctcccagtttgatggcttatcctccaaccccagcaagtctcaaggccgagca
cagcgtctgggctcctccagcgtgaggccgggcttgtaccactgctgcttcatggctccg
tacacccacttcacccaggccttagccgacgccagcctgaggaacatggtgcaggcggag
caggaccacgacacctcagggtggttcgatgtgcttcagaaggtatctacccagttgaaa
accaacctcacgagcgccactaagaatcgtgcggataagaatgctattcataaccacatt
cgtttgttcgagccgctggtcatcaaagctttaaagcagtacacaacgaccacgtccgtg
cagctgcagaggcaggttttggacctgctggcccagcttgttcagttacgggtcaattac
tgtcttctggactcagaccaggtgtttattggatttgtgctgaagcagtttgaatacatt
gaagtaggccagttcagggaatcagaggcaattattccaaacatctttttcttcctggta
ttactgtcttacgaacgctatcattcaaaacagatcattggaattcctaaaatcattcag
ctctgtgatggcatcatggccagtgggaggaaggctgtgacacatgccataccagctctg
cagccaatagtccatgacctctttgtactgagaggaaccaataaagccgatgcaggaaaa
gagctcgaaacccaaaaagaggtggtggtctcgatgctgctgagactcatccagtatcac
caggtgttggagatgttcatcctggtcctgcagcagtgccacaaggagaacgaagacaag
tggaagcgactgtctcggcagatagccgatgtcatcctcccgatgttagccaggcagcag
atgcacattgattctcacgaagcccttggagtgttgaatactttgtttgaaattctggcc
ccttcctccctccgtcctgtggacatgcttttacggagtatgtttgtcactccggacaca
atggcatctgtgagcactgttcaactgtggatctcaggaattctagccattttgagggtt
ctgatttcccagtcaactgaagatattgttctttctcgtattcaggagctctccttctcc
ccatatttaatctcctgtccaataattaataggttaagagatggggacagtacttcaaca
ccggaagaacacaatgaagggagacaaatcaagagtttgccagaggaaacattttcaagg
tttctactacaactagttggcattcttttggaggatattgttacaaaacagctaaaagtg
gaaatgagcgagcagcagcatactttctattgtcaagagctgggcacgctgctaatgtgc
ctgatccacatcttcaagtctggaatgttccggagaatcacagcagctgcctctagactc
ttcacggtggacaacgccgacggcagtttctacggcctggagaggctgaatgcacgggtg
cgagccatggtgcccacgcacccggccctcgtgctgctctggtgccagatcctgctgctc
gtcagccacactgactaccgctggtgggcagaggtgcagcagacccccaggagacgcagt
ctgtccagtacgaagtcactcagcccccagatgcctggagaggaggagggtcccgatgca
gcctgcaagcttgggatgtgcaatagagaaatagtgcgaaggggagctctcattctcttc
tgcgattacgtctgtcagaacctacacgattcagagcacctgacatggctcatcgtgaat
catatccaggacctgatcagtctgtcccacgagccgcccgtgcaggattttattagcgct
gttcatcggaactccgccgccagcggcctcttcatccaggcaattcagtctcgttgtgaa
aatctttcagcccccaccgccctgaagaagacgctgcagtgcttggaagggatccacctg
agccagtcgggcgccgtgttaacactgtatgtggacaagctcttgtgtactccgttccgt
gtgctggctcgcatggtcgacactctagcctgtcgccgggtggaaatgcttctggctgca
aatttacagagcagcacggcccagttgccagtggaggaactcagcagaatccaggagtac
cttcagagcagcgggctggctcagagacaccagaggctctattccctgctggacaggctt
cgtctcgccaccgcaccgggctcacgtggcccttctcctccggtcacgtcccacccgctg
gacggcgatgggcccctggcactggagaccgtgattccagacaaagactggtatctacgt
ctagtcaaatcccagtgctggactaggtcagattctgcgctgctggaaggggcagagctg
gtgaatcggattcctcccagtgacatgagtacattcatgatgaactcggaattcaactta
agcctgttggccccatgcctgggcctgggcatgcgtgaaatctctggaggccagaggagt
cccctttttgaagcagctcgcctggcgactctggaccgtgtgaccggcctggtccagcag
ctccctgcagcccaccacgttttccagccgttcctgcctgtggaacctaccgcctactgg
agcaagctgaatgacctgtttggggatgccgtgttgtatcggtccttgaccactctggcc
cgggccctggcccagtacctgctggtgttctccaaactgcccagtcatttgcacctccct
cctgagaaggagagggacactgtgaagtttgtggtcatgaccctcgaggccctggcatgg
catctgatccatgagcagatcccgctgagtctggaccttcaggcgggcctggactgctgt
tgcctggccctgcagctgcccagcctctggagcgtactgtcctccccggagatggtgacc
cacgcctgctctctcattcactgtgtccgcttcgtcctggaagccgttgtggtgcagcct
ggggaccagcttcttagtccagaaagaaggaggaacactccaaaggcttccagagaggat
gaagtggattcaaacacacaaaacccagcatatattaccgcagcctgtgggatggcagca
gaaatggtggagtctttgccgtcggtgttggccttggggcataagaggaatagcagcacc
cctgcgtttctcacgtctgtgctcaggaacatcatcatcagcttggctcgcttacccctc
gtcaacagctacacgcgcgttccccccttggtttggaggctcggatggtcacccaagccg
ggaggggactttggcacagccttccctgagatccctgtggagttcctccaggagaaggaa
gtctttaaagagttcatctaccgcatcaatgtgctagggtggaccagccgcacccagttt
gaggaaacgtgggccacccttcttggtgtcctggtgactcagcccctggtgatggagcag
gaggagagcccaccagaagaagacacggagaggacccagatcaatgtcctggccgtgcag
gccatcacctcgctggtgctgagtgcaatgaccgtgcccgtggctggcaacccagctgtg
agctgcttggagcagcagccccggaacaaacccctgaaagccctcgacaccaggtttggg
aggaagctgagcgttatccgaggaattgtagagcaggagatccaagcgatggtctcaaag
agagagaacgttgccacccaccacttataccaggcgtgggaccccgtcccttctctgtct
ccagctacgacaggtgccctcatcagccacgacaagctcctgctgcagatcaaccctgag
cgggagctggggaacatgagctataagcttggccaggtgtccattcactccgtgtggctg
gggaacagcatcacacccctgagagaggaggagtgggaggaagaggaagaggaggaggcc
gatgtccctgtccctgcgtcaccacccacgtcacccgtcaactccaggaagcaccgggct
ggggtcgatatccactcctgttcccagtttttgcttgaactgtacagtcgctggatcctg
ccgtcagggtcagccagaaggacccccatcatcctgatcagcgaggtggttcgatctctc
ctggtggtctcagacctgttcactgagcgcacccagtttgagatgatgtacctggcactg
acggaactgcggagggtgcaccctgcggaggacgagatcctcgcgcagtacctggtgccc
gccacctgcaaggcggccgccgtcctcggaatggacaaggccgtggcggagccggtgagc
cggctgctggagagcacgctgaggagcagccacctgcccagcaaggtcggggccctgcac
ggtgctctctacgtgctggagtgcgacctcctggatgagacggcgaagcagctcgtccca
gtcatcagcgactacctcctgtccaacctcaaaggggtggcccactgcgtgaacattcat
agccagcagcacgtgctggtcatgtgcgccactgccttctacctgatcgagaactaccct
ttggatgtaggcccagagttctctgcatcagtaatacagatgtgtggagtgatgctgtct
ggaagtgaggaatccaccccgtccatcatctaccactgtgttctgcggggcctagagcgt
ctcctgctctccgaacagctctgccggctggacgcggagtcgctggtcaagctgagtgtg
gaccgagtgaacgtgcacagcccacaccgggccatggccgccctgggcctgatgctcacc
tgcatgtacacagggaaggagaaaatcagtccgggcagaagctcagaccctagccctgcc
gccccagacagcgagtcagtgattgtggctatggagcgtgtgtctgtgctttttgacagg
gtcaggaaagggttcccctgtgaagccagagtggtggcacggatccttcctcagttttta
gacgacttcttcccaccccaggacgtcatgaacaaagtcattggtgaatttctgtccaac
cagcagccgtacccgcagttcatggccactgttgtgtacaaggttttccagactctgcac
agcaccgggcagtcgtccatggtccgggactgggtcatgctgtccctctccaacttcacg
cagaggacccccgtggccatggccgtgtggagcctctcttgcttcttcgtcagcgcttcc
accagcccgtgggtctcagccgtccttccccacgtcatcagcaggatgggcaagctggag
caagtggacgttaacctcttctgcctggtggccacggacttttacagacaccagatagag
gaggagctggaccgccgggccttccagtccgtgttcgaggtggtcgcggcaccaggaaac
ccatatcatcgattgctgacttgtttgcggaacgtccacaaggttgccacgtgctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (51)   

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