KEGG   Ailuropoda melanoleuca (giant panda): 100466896
Entry
100466896         CDS       T01329                                 
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
  KO
K22804  structural maintenance of chromosomes protein 6
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aml03400]
    100466896 (SMC6)
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     100466896 (SMC6)
SSDB
Motif
Pfam: AAA_23 SMC_N AAA_15 DUF3993 AAA_29 AAA_21
Other DBs
NCBI-GeneID: 100466896
NCBI-ProteinID: XP_034515768
Ensembl: ENSAMEG00000002654
Position
4:131272349..131342778
AA seq 1096 aa
MAKRKEDSFFSPENAKRPRQEELDDFDKDGDEDECTVSFTNGTSTLTAAEVGIIESIQLK
NFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLKGFVKDGQ
NSADISITLRNRGDDAYRANVYGNSIVVQQHISLDGSRSYKLKSETGTVVSTRKEELIAI
LDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMETKERTK
EQINQGEERLIELKRQCLEKEERFQSIAGLSTMKTNLENLKHEMAWAVVNEIEKQLNAIR
DNIKIGEDRAARLDRKMEDQQVRLNEAEKKYKDIQDKLEKISQETKARAPECMALKTDVT
VKKRVYNEAEVLYNRSLNEYRALKKDDEQLCKRIEELKKSTDQSLEPERLERQKKISWLK
ERVKALQDQESSINQEIEQFQQAIEKDKEERIRIKREELDVKHTLSYNQRQLKELKDSKT
DRLKRFGPHVPALLEAIDDAYRRGHFTCKPVGPLGACIHLRDPELALAIESCLKGLLQAY
CCHNHADERVLQALMERFYSRGTSRPQIIVSEFRNEMYDVRHRAAYHPEFPTVLTALEID
NAVVANSLIDMRSIETVLLIKNNSVARAVMQSQKPPKNCREAFTADGDQVFAGRYYSSEN
TRPKFLSKDVDSEISDLENEVENKKAQILNLQQHLSALEKDIKRNEEFLRRRQIHYRELK
VKITESISEIRELENIEEHQSVDIATLEDEAQENKIKMKMVEKNMEQQKENMEHLKSLKI
EAENKYDAIKQKINQLSDLAEPLKDELNLADSEVDNQKRGKRHYEEKQKEHLDTLNKKKR
ELDMKEKELEEKMSQARQICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIMRQ
YQEARETYLDLDNKVRTLKRFIKLLEEIMTHRYKTYQQFRRCLTLRCKLYFDNLLSQRAY
CGKMNFDHKNETLSISVQPGEGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRCL
DEFDVYMDMVNRRIAMDMILKMADSQRFRQFILLTPQSMSSLPSSKLIRILRMSDPERGQ
TTLPFRPVGQEEEDRS
NT seq 3291 nt   +upstreamnt  +downstreamnt
atggccaaaagaaaggaagacagtttcttctctcctgaaaatgccaaaagaccaagacaa
gaagagttggatgactttgacaaagatggtgatgaagatgaatgtacagtttctttcact
aatggtacctctactttgacagcagcagaagttggaataattgagagtattcagctaaaa
aactttatgtgtcattcgatgcttggaccctttaaatttggttctaatgtcaactttgtt
gttggcaacaatggaagtgggaagagcgccgtactcacagctctcatcgttggccttgga
ggaaaagcagttgctactaatagaggctcttctttaaaaggttttgtgaaagatggacag
aactcagcagatatctcaataacgttaaggaacagaggagatgatgcctatagagcgaat
gtgtatggcaactccatagtcgtgcagcaacacatcagcctggatggaagtcggtcttac
aaactaaaaagtgaaacaggcaccgtggtttctactagaaaagaagagctgattgcgatt
cttgatcattttaacatacaggtggataatccagtttctgttttaacacaagagatgagc
aagcagttcctgcaatctaaaaatgagggagacaaatacaaattcttcatgaaagcaacc
caacttgaacagatgaaagaagattattcatacataatggaaacaaaagaaagaacaaag
gagcagataaatcagggagaagagcgacttattgaactaaaacgccagtgtttggagaaa
gaagaacgttttcaaagtattgctggtttaagtacaatgaagactaatttagaaaacttg
aaacatgaaatggcttgggcagtggtcaatgaaattgaaaaacaattgaatgctatcaga
gataatatcaaaattggggaagatcgtgctgctagacttgacaggaagatggaagaccag
caggttagacttaatgaagcagaaaaaaaatacaaagatattcaagataaactggaaaag
attagtcaagagacaaaggcacgagcaccagaatgtatggcattgaaaacagatgttact
gttaagaaaagggtctataatgaagctgaggttttatataatcgatctctaaacgagtat
agagcattaaagaaagatgatgagcagctttgcaaaagaattgaagaactaaagaaaagt
accgatcaatctttggaacctgaacgcttggaaaggcaaaaaaaaatatcttggttaaaa
gagagagtaaaggccttgcaggatcaagaaagctcaatcaatcaagagatcgaacagttt
cagcaagccatagaaaaggacaaagaagaacggatcagaattaagagagaagaattagat
gtcaagcatacactgagctataatcagaggcaactgaaagaattaaaagatagtaaaact
gatcgactgaaaagatttggccctcatgttccagcccttcttgaagcaatagatgatgcc
tatagacgcgggcattttacctgtaaacccgtgggccctttaggagcttgcattcatctt
cgcgaccctgaacttgctttggctatcgaatcttgcttgaaaggacttctgcaggcctat
tgttgccataaccatgccgatgaaagagttcttcaggcactgatggaaaggttttattca
cgagggacctcacggccgcagataatagtttctgaatttcggaatgagatgtatgatgtc
agacacagagctgcttatcatccagagtttccaacagtcctgacagctttagaaatagat
aatgcagtggttgcaaacagcctgattgacatgagaagcatagagacggtgcttctgatc
aaaaataattctgtagctcgtgcagtaatgcagtctcaaaagccacccaagaattgtaga
gaagcttttactgctgatggtgatcaagtctttgcaggacgttactattcatctgaaaat
acaagacctaaattcctaagcaaagatgtggattctgagataagtgacttggagaatgaa
gttgaaaataagaaggcccagatattaaatcttcagcaacatttatctgcccttgaaaag
gatattaagcgcaatgaagaatttcttagaaggcgccaaatacattatagagagttaaag
gtaaaaataacagaaagtatttctgaaattcgggagcttgagaatatagaagaacaccag
tccgtagatattgcaacgttggaagatgaagctcaagaaaataaaatcaaaatgaaaatg
gttgagaaaaatatggaacaacaaaaagaaaatatggaacatcttaaaagtctgaaaata
gaagcagaaaacaagtatgatgcaattaaacagaaaattaatcagctctcagacctagca
gaaccacttaaggatgaattaaaccttgctgattctgaagtggataaccaaaaacgaggg
aagcggcattacgaggaaaaacagaaagaacacttggatactttaaataaaaagaaacga
gaactggatatgaaagaaaaagaactagaggagaaaatgtcacaagcaagacaaatctgc
ccagaacggatagaagtaaaaaaatctgcatcaattctggacaaagaaattaatagatta
agacaaaagatacaagcagaacatgctagtcatggagatcgagaggaaataatgaggcag
tatcaagaagcaagagaaacctatcttgatctggataataaagtaaggactttaaaaagg
tttattaaattgctggaagaaataatgactcatagatacaaaacatatcaacaatttaga
aggtgtttgactttacgatgcaaattgtactttgacaacctactgtctcagcgggcttat
tgtggaaagatgaattttgaccacaagaatgaaactctgagcatatcagttcagcctgga
gagggaaacaaagctgctttcaacgacatgagagccttatccggaggagaacgttctttt
tccacagtttgcttcattctttctctgtggtccattgctgagtctcctttcagatgcctc
gatgagtttgatgtctacatggacatggttaaccggaggattgcaatggacatgatactc
aagatggcagattcccagcgttttagacagtttatcttgcttacccctcaaagcatgagt
tcacttccatcaagtaaactgattagaatccttcgaatgtctgaccctgaaagaggacag
actacactgcctttccggcctgtgggtcaagaagaagaagaccgaagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (37)   

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