KEGG   Ailuropoda melanoleuca (giant panda): 100468086
Entry
100468086         CDS       T01329                                 
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X7
  KO
K05769  Rho guanine nucleotide exchange factor 4/29
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:aml00001]
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100468086 (SPATA13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aml04131]
    100468086 (SPATA13)
Membrane trafficking [BR:aml04131]
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    100468086 (SPATA13)
SSDB
Motif
Pfam: RhoGEF SH3_1 PH SH3_9 SH3_2
Other DBs
NCBI-GeneID: 100468086
NCBI-ProteinID: XP_011225101
Ensembl: ENSAMEG00000014159
Position
7:complement(65699060..66027237)
AA seq 1246 aa
MTTAQNGHGRLAAIPCSVSDPKDSKMVTYPACQNGGCSSSYCGEAEAQEARLSPAKLMRL
FSVSRKRTSDNPERPRSMVLMGNSSTWNALASFRKMGSFKKLKSSVLQGIQNREGSDEAK
EDAPERDPGKPIPNGAAIGMQTSGCPSSGPASDAPKAGPGGASDCSDPEEADDAFQRSTH
RSRSIRRAYGLGRISLLDCEKLQGTQNHVRPLAPVTQEPTVCEILVKDSENNSIIYRKSK
STDNLNFLKKSSFKRKSTSNLTDLKGAHEKPAPRRTLSSSSADSEKFGGSERRTKRWKSP
LRAKDFDRVLRFVSSATDAAWRRESPRSGAPSPGEASQRLQVHSRLHDAYSRRVSANAER
EWRRCAGAHAGSGCGSAGAPSHQVDVDTAVFPLEASGPWAAESARPCAGSASSSPVVQDS
DERQAGGQFTFEPEQPLTPPRPTTPKPPSPQSPGAGNATCPSSLSALSLSSVDSEERAEG
PVTSRDSVQAASDRGSEDSASTHPQLSPHLASGPEERKEEVVTEESWRRGSSRDEERTES
QRITRRKWGSGRRSRPRPLSDYGQLANRSLSIPEDSIAVDPQKEDTVEGDHQPNTASTDP
ADQNPAVGCPKGSWRRRPISVIGGVSFYGNSPTEEIESLLTQPAARPPVPAHQVLPYKAV
SARFRPFTFSQSTPIGLDRVGRRRQMRASNVSSDGGTESAALVDDNGSEEDYSYEDLCQA
NPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEASNKDWWW
GRNEDKEAWFPASFVRLRVNQEEPSENSSSTQGEELEEDAGKNRHKHSESKHQMRTNVIQ
EIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQ
YNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELSNLMKQGRYRHFFEACRLLQQ
MIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSNIKAAYEAMKNVACLINERKR
RLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTRITKHGKSQQRTFFLFDHQLVSC
KKDLLRRDVLYYRGRTDMDGVELVDLEDGRDKDWNLNVRNAFKLVSKTTDEVHLFCAKKQ
EDKARWLQACGDERRRVQEDREMGMEISENQKKLAMLNAQKAGHGKSKGYSGCPVAPPHQ
SLHPLHQRHVTVPTSVPQQQVFALAEPKRKPSLFWHTFNKLTPFKK
NT seq 3741 nt   +upstreamnt  +downstreamnt
atgacaacagctcagaatggccatgggcgacttgccgcaatcccatgttctgtctcggat
cccaaagactccaaaatggtgacttacccagcatgtcagaatggaggatgcagcagcagc
tactgcggggaggcggaagcccaggaggccagactcagcccggccaagctcatgcgcctc
ttctccgtgagcaggaagaggaccagcgacaaccccgagaggccccgctccatggtcctg
atgggaaactcctccacctggaatgctctggcctcctttcggaaaatgggatctttcaaa
aaattgaagtcctccgtccttcaaggaattcagaaccgagagggctcagatgaggcaaag
gaagacgcccccgaacgtgacccagggaaacccatcccgaacggcgctgcaatcggaatg
caaaccagcgggtgcccctcctcgggaccagcaagcgacgccccgaaggcagggccaggg
ggcgcgtcggactgctccgaccctgaagaggccgacgacgccttccagaggagcacccat
cggtcccgcagcatccgccgcgcctatggcctgggccgcatcagcctcctggattgcgag
aagcttcaagggacccagaaccacgtccggccgctggcccctgtcacccaggagcccacc
gtgtgtgagatcctagtgaaggactctgagaacaacagcatcatctacaggaaaagcaag
agcacagataacttgaactttctgaagaagagctccttcaaacggaagtccacctcaaat
ctcacggacctcaagggggcgcacgaaaagcccgcgccccggcggacactaagcagttca
tctgccgactcggaaaagttcggtgggtccgagaggaggacgaaacgctggaagagccca
ctgcgggccaaggactttgacagagtcctgaggtttgtgagcagcgccacggacgcggcc
tggaggagagagagccccaggagcggggcgccctcgccgggcgaggcgagccagcggctg
caggtgcacagcaggctgcacgacgcctactcccgccgcgtgtctgccaacgccgagcgt
gagtggaggaggtgcgcaggcgcgcacgcaggctcggggtgcggctccgctggggctccg
agccaccaggtggacgtggacacggccgtctttcctctggaagcctcaggcccctgggcg
gctgaaagtgcccgtccttgcgctggcagcgcctcatcgagtccggttgtccaggactcg
gatgaacgccaagctggcggccagtttacattcgaacctgagcagccgctcaccccccca
aggcctaccacacccaagccccctagccctcagagcccaggcgcaggaaatgccacgtgt
cccagcagtctcagtgcgctgtccctgagttcagtggacagtgaagaaagggcagagggg
cctgtgacctcccgggattctgtgcaagccgcaagtgacagaggcagtgaggacagcgcc
agcacccaccctcagctgagcccccacctggcgtcgggtccagaagaaaggaaggaggag
gttgtgacagaggaatcctggaggcggggctcatcccgggatgaagaaaggacagaatca
cagaggatcaccaggaggaaatggggttctgggagaagatccaggccccgaccactctct
gactatggccagctggccaaccggagtctgtctattcctgaagactcaattgctgtagac
ccccagaaagaagacactgtggagggagaccaccagccaaacacggcctccacggaccct
gcagaccagaaccctgctgtgggctgccccaaaggaagctggagaagacgccccatctct
gtgataggcggggtcagcttctatgggaacagcccaacagaggaaatagagagccttcta
acccaaccggcagccaggcctcctgtgcccgctcaccaggtgctgccctacaaggcggtt
tcggcccgcttccggcccttcaccttctcccagagcacccccattgggctggaccgcgtg
ggacgccggcggcagatgcgagcatccaatgtttcttcagatggaggcactgagtctgct
gccttagtggatgacaacggcagtgaggaggactatagctatgaagacctctgtcaggcc
aaccccagatacctacagccaggcggggagcagctggccatcaacgagctgatcagcgat
ggcagtgtggtctgcgcggaagccctatgggaccacgtgaccatggacgaccaggagctg
ggcttcaaggcaggagatgtcatccaggttctggaagcctctaacaaggactggtggtgg
ggccggaatgaggacaaggaagcctggtttcccgcaagctttgtcagattgcgtgtcaat
caggaagagccgtcggagaattccagcagcacccagggcgaggagctggaggaggatgcc
ggcaagaaccgccacaaacactcggagagcaagcaccagatgaggaccaatgtcatccag
gagatcatgaacacggagcgggtgtacatcaagcacctcaaggacatctgtgagggctat
attcgacagtgtcgcaagcacacgggaatgttcactgttgcacaactagccaccattttt
ggaaacattgaggatatttacaaattccaaagaaagttcctgaaagaccttgagaaacag
tacaataaagaggaacctcatttaagtgaaataggatcctgctttcttcaacaccaagag
ggctttgccatctattccgagtactgtaacaaccatccgggcgcctgtgcggagctgtcc
aacctgatgaagcagggcaggtacagacacttctttgaagcctgccgcctgctccaacag
atgattgacatcgccatcgacgggttcctgctgacgccggtgcagaagatctgcaagtac
cctctgcagctggccgagctgctcaagtacaccacgcaggagcacagtgattacagcaac
ataaaggcagcctatgaagccatgaagaacgtagcctgtctgatcaacgagcgcaagcgc
aggctggaaagcatcgacaagatagcgcggtggcaggtgtccattgtaggctgggagggg
ctggatatcctagaccgaagttccgaactgatccattctggggaactgaccagaatcacc
aagcacggcaagagccagcagcggacgttcttcctgtttgaccaccagctggtgtcgtgc
aagaaggacctgctgcgtagggacgtgctctactaccgaggccgcacggacatggatggg
gtggagcttgtggacctggaggacggccgggacaaggactggaacctcaacgtgaggaac
gcgttcaagctcgtcagcaaaaccaccgacgaagttcatctgttctgtgccaaaaagcaa
gaggacaaggcgcggtggctgcaggcctgtggggatgaaaggcggcgcgtgcaggaggac
cgcgagatgggaatggaaatttcagaaaatcaaaagaaactcgccatgttaaatgctcaa
aaggcgggacatggaaagtcaaaaggctacagcggatgccccgtggccccgccgcaccag
agcttgcaccccctccaccagcgccacgtcaccgtgcccaccagcgtcccccagcagcag
gtgtttgccctggcagaacccaagaggaagccgtctctcttctggcacacattcaacaaa
ctcactcctttcaagaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (12)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (5)   
   Pfam (5)   
All databases (69)   

Download RDF
DBGET integrated database retrieval system