KEGG   Ailuropoda melanoleuca (giant panda): 100469601
Entry
100469601         CDS       T01329                                 
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    100469601 (KDM2A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aml03000]
    100469601 (KDM2A)
   04121 Ubiquitin system [BR:aml04121]
    100469601 (KDM2A)
   03036 Chromosome and associated proteins [BR:aml03036]
    100469601 (KDM2A)
Enzymes [BR:aml01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     100469601 (KDM2A)
Transcription factors [BR:aml03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    100469601 (KDM2A)
Ubiquitin system [BR:aml04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     100469601 (KDM2A)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100469601 (KDM2A)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     100469601 (KDM2A)
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box JmjC Cupin_8 LRR_4 Cupin_1
Other DBs
NCBI-GeneID: 100469601
NCBI-ProteinID: XP_011225839
Ensembl: ENSAMEG00000000531
UniProt: G1L165
Position
16:85632926..85742298
AA seq 1162 aa
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGDEEAVDREPRRLSNRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKT
LSADSSSDSSRGSHNGQVWDPQCSPRKDRKVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEELANSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDNSEKAQKRKMEESDEEAVQAKVLRPLRSCDEPLTPPPHSPT
SMLQLIHDPVSPRGMVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHC
PARTPQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMS
VFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLS
WTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIR
DLLTPPADKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQ
SSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHF
ISDLSINSLYCLSDEKLIQKIS
NT seq 3489 nt   +upstreamnt  +downstreamnt
atggaacccgaagaagaaaggattcgttacagccagagattgcgaggtaccatgcgacga
cgctatgaagatgatggcatttcagatgatgaaattgaagggaaaagaacttttgacttg
gaagaaaaactccacaccaacaaatataatgcaaattttgttacttttatggaggggaaa
gattttaatgtagagtatatccagcggggtggcttgagagaccctctgattttcaagaat
tctgatggacttggaataaaaatgccagatccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgtcgcatggtggatgtcatggatgtgaacacacagaaaggcattgaa
atgaccatggctcagtggacacgctactatgagaccccagaggaagagcgagaaaaactc
tataatgtcatcagtctagagttcagccacaccaggctggagaacatggtgcagaggccc
tccacggtggatttcattgactgggtggacaacatgtggccaaggcatttgaaggaaagt
cagactgaatcaacaaatgccatcttggagatgcagtaccccaaagtacagaagtactgt
ctaatgagtgttcgaggctgctatactgacttccatgtggactttggtggtacctctgtt
tggtatcacatccatcaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtgtcagattgccagcgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtatactcctacagacacattagtctttggaggcaattttttg
catagcttcaatatccccatgcagttaaaaatatacaacattgaagatcggacacgggtt
ccaaataagttccgttatccattctactatgagatgtgttggtacgtgttggagcgctat
gtgtactgcataacaaaccgctcccacctaactaaggaatttcagaaagagtccctcagt
atggacttggaattaaatgggttggaatctggaaatggggatgaagaagcagtggatcga
gaaccgaggcgcctgagcaataggcgttctgtcctcactagccctgtagccaatggggtc
aacctggattatgacggactgggcaaaacctgccgaagtcttccaagtctgaagaaaacc
ttgtcagcggactcatcctctgactctagccggggctcccacaatggccaagtgtgggat
ccccagtgcagtccccgaaaggacaggaaggtgcatctgacccattttgagcttgagggc
ctccgctgtcttgtagataagttggagtctctgccactgcacaagaaatgtgtccccaca
gggatagaagatgaagatgctcttattgctgatgtgaagattttgctggaggagcttgcc
aacagcgatcccaagttagccctcactggagtccctatagtacagtggccaaaaagggat
aagcttaaattccccacccggccaaaggtgcgggttcctaccatccccatcacaaagcct
cacactatgaaaccggctcctcggttaacacctgtgaggccagctgccgcctcccccata
gtgtcaggagccaggcggagacgagtgcgctgtcggaaatgcaaagcctgtgtgcaagga
gagtgtggtgtatgccactattgcagggacatgaagaagtttggggggcctggtcgcatg
aagcagtcctgtgtccttcggcagtgcttggcacccagactgcctcactcagtcacgtgt
tccctctgtggagaggtggatcaaaatgaggagacacaggactttgagaagaaactcatg
gaatgctgtatctgcaatgagattgttcatcctggctgcctccagatggatggagagggg
ctgcttaatgaggaattgccaaattgctgggagtgtccaaagtgctaccaggaggacaac
tcagagaaagcccagaagcggaaaatggaagagagtgatgaagaagccgtgcaagccaaa
gtcctgcggcccctgcggagctgcgacgagcccctcacgcccccgcctcactcacccact
tccatgctgcagctcatccatgacccggtctccccccggggtatggtgactcggtcatcc
cctggggctggccccagcgaccaccacagtgccagccgcgatgagcgcttcaaacggcgg
cagttgctgcggctgcaggccacagagcgcaccatggtacgggaaaaggagaacaatccc
agcggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcgtacctcact
gtcacgctgcagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcag
gccatcacggcctcctctgccaaccttcgccattccccccgtgtgctagtgcagcactgc
ccagcccgaaccccccagcgtggggatgaggaggggctggggggagaggaggaggaagag
gaggaggaggaggaggaagatgacagtgcagaggaggggggtgcagccaggctgaatggc
cggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtct
gtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacgtgg
tataaatggtgctgcgacaagagactttggacaaaaattgacttgagtaggtgtaaggct
attgtaccccaggctctcagtggcatcatcaagaggcagccagtcagccttgacctcagt
tggaccaacatctccaagaaacaactgacgtggcttgtgaacaggctgccaggactgaaa
gacctcctcctagcaggctgttcctggtctgcagtgtctgccctcagcacctccagctgc
ccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccctcaaattcgg
gacttgctgactccaccggctgataaaccaggtcaggacaatcgcagcaagctccggaat
atgactgacttccggctggcaggccttgacatcacggacgccacgcttcgcctcatcatt
cgccacatgcccctcctctctcgactcgacctcagtcactgcagtcacctgacagatcag
tcctccaatctgctcaccgctgtcgggtcttccactcgctactccctcacagagctcaac
atggcaggttgcaataaactgacagaccagaccctgatctacctacggcgcatcgccaac
gtcaccttgatcgaccttcgaggatgcaagcagatcactcgaaaagcctgcgagcacttc
atctcagacttgtccatcaacagtctctactgcctgtctgacgagaagctgatacagaag
atcagctaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (60)   

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