KEGG   Ailuropoda melanoleuca (giant panda): 100472170
Entry
100472170         CDS       T01329                                 
Symbol
ATG2A
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
  KO
K17906  autophagy-related protein 2
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04136  Autophagy - other
aml04140  Autophagy - animal
aml05010  Alzheimer disease
aml05014  Amyotrophic lateral sclerosis
aml05016  Huntington disease
aml05017  Spinocerebellar ataxia
aml05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:aml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100472170 (ATG2A)
   04136 Autophagy - other
    100472170 (ATG2A)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100472170 (ATG2A)
   05014 Amyotrophic lateral sclerosis
    100472170 (ATG2A)
   05016 Huntington disease
    100472170 (ATG2A)
   05017 Spinocerebellar ataxia
    100472170 (ATG2A)
   05022 Pathways of neurodegeneration - multiple diseases
    100472170 (ATG2A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aml04131]
    100472170 (ATG2A)
   03029 Mitochondrial biogenesis [BR:aml03029]
    100472170 (ATG2A)
Membrane trafficking [BR:aml04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    100472170 (ATG2A)
Mitochondrial biogenesis [BR:aml03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    100472170 (ATG2A)
SSDB
Motif
Pfam: ATG2-VPS13_C Chorein_N ATG2_CAD TERF2_RBM
Other DBs
NCBI-GeneID: 100472170
NCBI-ProteinID: XP_011219916
Ensembl: ENSAMEG00000017758
Position
16:complement(83703151..83723097)
AA seq 1930 aa
MSRWLWPWSNCVKERVCRYLLQHYLGHFFQEHLSLDQLSLDLYKGSVALRDIHLEIWSVN
EVLESIDSPLELVEGFVGSIEVAVPWAALLTDHCTVHVSGLQLTLQPRQGPGPGAADSQS
WASCMTTSLQLAQECLRDGLPEPSEPPQPLEGLEMFAQTIETVLRRIKVTFLDTVVRVEH
SPGDGEHGVALEVHVQRLEYCDEAVRDPSQAPVVDVHQPPAFLHKLLQLAGVRLRFEELP
PQEDPPKPPLQIGSCSGYMELTVKLKQNEAFPGPKLEVAGQLGSLHLLLTPQQLQQLQEL
LSAMSLADPDSLIDKLNKSRPLGAEDLWLIEQDLNQQLQAGAVAEPLSPEPLTNPLVNLD
NTDLFFSMAGLTSSVASALSELSLSDVDLGSSVHSDMTPRRLSAHAHPTGKTAPTPLPDT
LRPDSLVKMTLGGMTLTLLHTSAPSSGPPDLTTHFFSEFDATKDGPFGSRDFHHLRPRFQ
RACPCSHVRLTGTAVQLSWELWTGRGRRTTSTQVHFGQLEVLECLWPRDATEPEYTEILS
FPSSPGSQASARPCAHLRHTQTLHRMSKSRPRRSIVCRCHSELALDLADFKADVELGALD
RLAALLCLATMPPPEPPAGLLTEPAPAAEQQTVVRLSAPRATLQLHFPIADLRPERDPWA
GRAVRAERLRLELSEPQFRSELNSGPGPPVPTRLELTCSDLHGTYEDGEKPPIPCLRVSK
ALDPKSAGRKYFLPQVVVTLHPQLSSAQWEVAPEKGEELELSAESPCELREPEPSPFSSK
RTMYETEEMVIPGDPEEMRTFQTRALALSRCSLEVLLPSAHIFLPSKEVYESLYNRINND
LLMWEPADLLPAPDPAAHPPGFPGSSGFWHDNFKMCKSAFKLDSDSEDEDAHFFSVGASG
APQPPAPESPSPRSQSTFSTLVTVLKGRITALCETKDEFGRRLETSHGELVLDVEQGTIF
SVSQYRGQPGLGYFCLEAERARLYHRAAVDNYLLPSHLELPSFAPPAQLAPTIYPSEEGV
TERGASGPKSQGRGPHMLSTAVRIHLDPHKNVKEFLVTLRLHRATLRHFMALPEQSWHSQ
LLEFLDVLDDPVLGYLPPTVITVLHTHLFSCAVDYRPLYLPVRVLVTTETFTLSSNIIMD
TSTFLLRFILDDSALYLSDKCEMETPDLQRDYVCVLDVDLLELVIKTWKGSTEGKLSQPL
FELRCSNNVVHVHSCADSCALLVNLLQYVMSEGDLHPPPRPPSPTEIAGQKVQLSESPAS
LPSCPPVETALINQRDLADALLDTERSLRELTQTSGGPLPQASPVSVYLFPGERSGAQPH
LPSVVTPAGSLGSHSEAKEDEKEEGDGDTLDSDEFCILDAPGLGIPPRDGEPVVTQLHPG
PIVVQDGYFSRPLGSTDLLRAPAHFPVPTSRVVLREVSLVWHLYGGRDFGPHPGHRARGS
FMGPRGSPSRCSGPNRPQNSWRMQGGSGRQHHVLMEIQLSKVSFQHEVYPAEPAAGPAAP
SQELEERPLSRQVFIVQELEVRDRLASSQINKFLYLHTSERLPRRAHSNMLTIKALHVAP
TTNLGGPECCLRVSLMPLRLNVDQDALLFLKDFFTSLVAGINPMVTAETSAEARPDPRVQ
PSSLQEGQPEDAEVTGSREAAGGGHGSPAEQQPIYFREFRFTSEVPIWLDYHGKHVTMDQ
VGTFAGLLIGLAQLNCSELKLKRLCCRHGLLGVDKVLGYALNEWLQDIRKNQLPGLLGGV
GPMHSVVQLFQGFRDLLWLPIEQYRKDGRLMRGLQRGAASFGSSTASAALELSNRLVQAI
QATAETVYDILSPAAPIPRSLQDKRSVRRLRKGHQPADLREGVAKAYDTVREGILDTAQT
ICDVASRGHEQKGLTGAVGGVIRQLPPTVVKPLILATEATSSLLGGMRNQILPDAHKDHA
LKWRSDEGQD
NT seq 5793 nt   +upstreamnt  +downstreamnt
atgtcacgatggctgtggccatggtcgaattgtgtgaaggagcgggtatgccgctacttg
ctgcagcactacttgggtcacttcttccaggagcacctcagcctggatcagctcagcctc
gacttgtacaagggcagcgttgccctgcgggatatccacctggagatctggtctgtgaac
gaagtgctggagtccatagactcacccttagagctggtggaaggcttcgtgggctctatc
gaggtggccgtgccctgggctgcgctgctcaccgaccactgcaccgtgcacgtgtcaggc
ctccagctcacgctgcagcctcgccaaggcccagggccaggggctgccgactcgcagagc
tgggcctcatgtatgaccacgagcctgcagctggctcaggagtgccttcgggacgggctg
cccgagccctctgagccaccacagcccctggagggactggaaatgtttgcccagaccatt
gagactgtgctgcgaaggatcaaggtgaccttcctggacactgttgtgagggtggagcac
tcaccaggtgatggggagcacggcgtggcactagaagtccacgtgcagagactggagtac
tgtgatgaggcagtgcgggacccaagccaggcgcctgtggtggacgtgcaccagcctcct
gcctttctgcacaagctgctgcagctggcaggggtccgcctgcgcttcgaggagctcccc
ccacaggaagatcccccgaaaccccccttgcagatcggcagctgctcagggtatatggaa
ttgacagtgaaattgaagcagaatgaggccttcccaggccccaagctggaggtggctgga
cagctgggctccttgcacctgctcctgacccctcagcagctccagcagcttcaggaactg
ctcagtgccatgagccttgcagaccctgacagcctgattgacaagctgaacaagagccgc
ccgctaggtgctgaagacctgtggctgatcgagcaggacctgaaccagcagctgcaggca
ggggctgtggccgagcccctcagcccagaaccccttaccaaccctcttgtcaacctggac
aacactgacctcttcttctccatggcgggccttacgagcagtgtggcctcagccctctct
gagctctccctctcggatgtagacctgggatcctctgtgcacagcgacatgacccctcgc
cggctctctgcccatgctcacccaactggcaagacggcccccacgcccctcccggacacc
ctgcgccctgactcactggtgaagatgaccttggggggcatgaccctgaccttgcttcat
acgtctgccccatcttccggaccacctgacctcaccacccactttttttcggagtttgat
gccaccaaggatgggcccttcggctcccgggacttccaccatctccgaccgcgcttccag
agagcctgtccctgtagccatgtccggctaacggggacagccgtgcagctgtcctgggag
ctgtggactggcaggggccggcggacgaccagcacgcaagtgcacttcgggcagctcgag
gtgctggagtgcctatggcccagggacgcgacagagcccgagtacacagagatcctgagc
ttccccagcagcccaggttcccaggcctcagctcggccctgtgcccacctgcgtcataca
cagactctccaccggatgtccaagagccgcccccggcgctccattgtctgccgttgccac
tcagaactggccctggacctggctgatttcaaggcagatgtggagctgggggccctggac
cggcttgctgccctgctgtgcctggctaccatgccccctcccgagccacctgctggcctc
ctgacagaacccgcaccagctgccgagcaacagacggtggtgcggttgtcagcaccccgg
gccacactgcagctgcacttccccatcgccgacctgcggcccgagcgggacccctgggca
ggccgggctgtgcgggccgagcggctgcggctagagctgagtgagccccagttccggtca
gagttgaacagcggtcctggtcccccggtccctacccgcctggaacttacctgttccgac
ctgcatggcacttacgaagatggagagaagccacccatcccctgcctgcgggtctccaaa
gctctggatcccaagagcgctgggcgcaaatacttcctgcctcaggtcgtggtgacgcta
cacccccagctcagcagcgcacagtgggaggtggcccctgagaagggagaggagctggag
ctgtcagccgagagtccctgtgagctgcgggagcctgagccctcacccttctcctccaag
aggaccatgtacgagacagaggagatggtgattcctggagacccggaggagatgaggacc
ttccagacccgggccctggcgctgtcgcgctgcagcctggaagtgctgctgcccagcgcc
cacatcttcctgcccagcaaggaggtctacgagagcctctataacaggatcaacaacgac
ctgctcatgtgggagcctgcggacctgcttcctgcccctgaccccgccgctcacccccct
ggcttcccgggctcctcgggcttctggcatgacaacttcaagatgtgcaagtcagccttc
aagctggactcagactcagaagatgaggatgcccacttcttctcagtgggggcatcaggc
gctccccagccccctgcccccgagtccccaagtcctcgctcccagagtaccttctctaca
ctggtgacagtgctgaagggtcggatcacagccctctgtgagactaaggacgagtttggg
aggcggctagagacctcacacggggagctagtgttggacgtggagcaaggcactatcttc
agtgtgtcccagtaccgaggccagccggggctcggctacttctgcctggaagctgagagg
gcaaggctctaccaccgagcggctgtggacaactacctgctgcccagtcacctggagctg
cccagctttgctcccccggcccagctggccccaaccatctacccttcggaggaaggggtg
accgaacggggagcctcgggccccaagagccagggccggggtccccacatgctgtccaca
gctgtgcgcatccatctggacccccacaagaatgtcaaggagttcctggtgacactgagg
ctccacagggccaccctacgccacttcatggctctaccagaacagagttggcactcccag
ctgctggagttcttagatgtacttgatgacccagtgctgggctacctgcccccgaccgtc
attaccgtcctgcacactcacctgttctcctgcgccgtggactacaggcccctctacctc
cctgtgcgtgtccttgtcaccactgagaccttcaccctctccagcaacatcatcatggac
acctccactttcctgctcaggttcatccttgatgactcagccttatacctgtccgacaag
tgtgagatggagaccccagatctgcagcgagattatgtctgtgtcttggatgttgatctt
ctggagcttgtgattaaaacctggaaggggagcaccgagggcaaactgagccagccgctg
ttcgagctgcgctgttccaacaacgtggtgcacgtgcacagctgcgcagactcgtgcgcc
ctgctggtcaacctgctgcagtacgtgatgagtgagggcgacctacacccccctccccgg
ccccccagccccacggagatcgctggtcagaaggtacagctctctgagagccctgcctcc
ctgccctcctgccccccggtggagacagccctcatcaaccagcgggacctggctgacgcc
ctcttggacactgagcgcagcttgcgggagctgacccagacttcaggtggccccctccct
caggcctcgcctgtgtcagtctacctattcccaggtgaacggagtggggcccagccccac
ttgccctctgttgtgactcccgctggcagcttggggtcccactcagaggccaaggaagat
gaaaaggaagagggagatggagacactctggacagtgacgagttctgcatcctcgacgct
cctggcctgggcatcccgccccgagatggggagcctgtggtgacacagctgcatccaggc
cccatcgtcgtgcaggacgggtacttctctcggcccctgggcagcacggacctgctgcgg
gcgccggcccacttccccgtgccgaccagccgagtggtgctgcgggaggtctcgctcgtc
tggcacctctatgggggccgggactttggcccccaccctggccacagggcaagaggcagc
ttcatgggccccaggggctccccttcccgctgctccggccccaaccggccccagaactct
tggcgtatgcaggggggcagtgggaggcagcaccacgtcctcatggagatccagctcagc
aaggtaagcttccagcacgaggtttacccggcagagcccgccgcgggccctgcggccccc
agccaggagctagaggagcggccactgtcccgccaggtgttcatcgtgcaggagctggag
gtccgagaccgtctcgcctcttcccagatcaacaagttcctgtacttgcacacgagcgag
aggctgccacgtcgcgcccactccaacatgctcaccatcaaagccctgcacgtggccccc
acgaccaacctcggtgggcccgagtgctgtctccgcgtctcgctgatgcccctgcggctc
aacgtggaccaggacgccctgctcttcctcaaggacttcttcaccagcttggtggccggc
atcaatcctatggttacggcggagacgtccgctgaggctcgccctgacccccgagtccag
cccagcagcctccaggaaggacagcctgaggacgcagaggtgaccggctcccgggaggct
gcgggcggtggacacggctcccctgctgagcagcagcccatctacttcagggagttccgc
ttcacgtctgaggtgcctatctggttggattaccatggcaagcacgtcaccatggaccag
gtgggcactttcgctggcctcctcatcggcctggcccagctcaactgctccgagctgaag
ttgaagcggctttgttgccgacatggactcctgggtgtggacaaggttctgggctatgct
ctcaacgagtggctgcaggatatccgcaagaaccagctgcctggtctgctggggggtgta
ggccccatgcactcagttgtccagctcttccaagggttccgggacctgctttggctgccc
atcgagcagtacagaaaggatgggcgcctcatgcgggggctgcaacggggggctgcctcc
tttggctcgtccacggcctcagccgcgctggaactcagcaaccggctggtgcaggctatc
caggctacagctgagaccgtgtacgacatcctgtccccagcggcgcccatcccccgctcc
ctgcaggacaagcgctctgtgcgaaggctacgaaagggccaccagcccgctgacctccgg
gagggtgtggcgaaggcctatgacacagttcgagagggcatcctggacacggctcagacc
atctgtgatgtggcttctcggggccacgagcagaaggggctgacgggcgccgtggggggc
gtgatccgccagctgcccccaaccgtggtgaagcccctcattctagccacggaggccacg
tccagtctgctcggagggatgcgaaaccagatccttcctgacgcgcacaaggaccacgct
ctcaagtggcgctcggacgaaggccaggactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (44)   

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