KEGG   Ailuropoda melanoleuca (giant panda): 100473633
Entry
100473633         CDS       T01329                                 
Symbol
RAD18
Name
(RefSeq) E3 ubiquitin-protein ligase RAD18 isoform X2
  KO
K10627  E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aml04121]
    100473633 (RAD18)
   03400 DNA repair and recombination proteins [BR:aml03400]
    100473633 (RAD18)
Enzymes [BR:aml01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100473633 (RAD18)
Ubiquitin system [BR:aml04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100473633 (RAD18)
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    100473633 (RAD18)
SSDB
Motif
Pfam: SAP zf-C3HC4_2 zf-C3HC4 zf-RING_6 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX CpG_bind_C zf-RING_5 zf-WRNIP1_ubi zf-rbx1 LEM SAP_new25 Rad50_zn_hook Sina_RING
Other DBs
NCBI-GeneID: 100473633
NCBI-ProteinID: XP_002920426
Ensembl: ENSAMEG00000012375
UniProt: G1M127
Position
4:complement(48886062..48988218)
AA seq 501 aa
MDSLVEPRWPPGLAVMKAIDDLLRCGICFEYFNIAVMIPQCSHNYCSLCIRKFLSYKTQC
PTCCVTVTEPDLKNNRILDELVKSLNFARNHLLQFSLESPPISPACSSSKNRAAKVHTPV
AFRHSLKQGSRLMENFLIRETGGSTSELLIKENESKFVPQKEVSTSSKTKETPSIEKAAS
CSVDSHVPETPSTSALKQVTKVDCPVCGVSIPENHINKHLDSCLTREEKKESLRSSVHKR
KPLPKTVYNLLSDRDLKKKLRQHGLSIQGNKQQLIKRHQEFVHMYNAQCDALHPKSAAEI
VQEIENMEKTRMRLEASKLNESIMVFTKDQTEKEIDEIHSKYRKKHQNEFRLLVDQAKKG
YKKTVEMSKKKVTKEEDGSTEKLLPLCVEQEDKKMKFSDTPPVTNHFSQSKLESPGRMEP
DRTDDSSSCTDIQEEALSSPESDSFNSSSSDIIRDLLEEEEAWEASHRNDLQDAEMSPRQ
NRRTRSAEGAEIEPRNKRNRN
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggactccctagtcgagcctcggtggcctccaggcctggcagtcatgaaggcaatagat
gatttgctgcgctgtgggatttgctttgaatatttcaacattgcagtgatgattcctcag
tgttcacataactactgttctctctgtataagaaaatttctgtcctataaaacacaatgt
ccaacttgttgtgtgacagtcacagagccggacctaaaaaataaccgcatattagatgaa
ctggtaaaaagcttgaattttgcacggaatcatctgttgcagttttccttggaatcacca
cccatatctcctgcttgctcctcttcaaagaaccgcgctgccaaagtacacactcctgta
gccttcagacattctttaaagcaaggaagcaggttaatggagaatttcttgatcagagaa
actggtggttccacatcagagttgttgataaaagagaatgagagtaaattcgtccctcag
aaagaggtgagcacttcttcgaagaccaaagaaacaccttctatagaaaaggcagcttcg
tgttctgttgatagtcatgttcctgagacaccttctacatcagctttgaaacaggttacc
aaagtggattgtcctgtttgcggggttagtattccagaaaatcacattaataagcactta
gacagctgtttaacacgggaggagaagaaggaaagcctcagaagttctgttcacaagagg
aagcctctgcccaaaactgtatataacttgctctcagatcgcgatttaaagaaaaagcta
agacagcatggattatctattcaaggaaataaacaacagctcattaaaaggcaccaagaa
tttgtacacatgtacaatgcccagtgcgatgctttgcatcctaaatcagctgcggaaata
gttcaagaaattgaaaatatggagaagactaggatgcgtcttgaagctagtaaactcaat
gaaagcataatggtttttacaaaggaccaaacagaaaaggaaatagatgaaattcacagt
aaatatcgtaaaaagcatcagaatgaatttcggcttctggtggatcaggccaaaaaagga
tacaagaaaactgttgaaatgtcaaaaaaaaaagtaacaaaagaagaagatggatctaca
gaaaagctattacctctatgcgtggagcaggaagataaaaaaatgaaattctcagatact
cccccggtaacaaaccacttctctcaatcaaagctggaatccccagggagaatggagcct
gatagaacagatgattcttctagttgtactgatattcaagaagaagctctttcttcacca
gaatcagactcattcaatagttccagttcagacatcataagagatcttcttgaagaagag
gaagcctgggaagcatcacatagaaatgatcttcaggatgcagaaatgagtccaagacag
aatcgtcgtacaagatcagcagagggtgctgagattgagccgagaaataagcggaatagg
aattag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (36)   

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