KEGG   Ailuropoda melanoleuca (giant panda): 100474664
Entry
100474664         CDS       T01329                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100474664 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100474664 (WDR33)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     100474664 (WDR33)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Collagen eIF2A Ge1_WD40
Other DBs
NCBI-GeneID: 100474664
NCBI-ProteinID: XP_002927747
Ensembl: ENSAMEG00000011757
UniProt: D2HY09
Position
2:92386046..92497513
AA seq 1336 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGNSGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGMQGPP
AQGSMLGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPI
PFQQQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSR
GPPNHHMGPMSERRHEQSSGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFH
PDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGR
RPGDERFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDSFPGPEDFGPEENFDPSD
EAARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPR
PDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGGK
GRGGPGPSQRVPKSGRSSSLDGDHHDGYHRDEPFGGPPGSGTASRGGRSGSNWGRGSNMN
SGPPRRGASRGGGRGR
NT seq 4011 nt   +upstreamnt  +downstreamnt
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccaacaccaa
gcaccccgacaactattttataagcgacctgattttgcacagcagcaagcaatgcaacag
cttacctttgatggaaaacggatgagaaaagcagtaaaccgaaaaaccatagactataat
ccgtctgtaattaagtatttggagaatagaatatggcaaagagaccagagagatatgcgg
gcaattcagcctgatgcaggttattacaatgatctggtcccacctatagggatgttgaat
aatcctatgaatgcagtaacaacaaaatttgttcgaacatcaacaaataaagtcaagtgt
ccagtatttgttgttaggtggactccagaaggaagacggttggtcactggagcttctagt
ggagagttcaccttgtggaatggactcaccttcaactttgaaaccatattacaggctcat
gatagcccagtgagggccatgacttggtcacataatgacatgtggatgttgacagcagac
catggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcatggtgcagatgtgaaatgtgtagactggcatccaacaaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacactccatgcccataaaaacacagtaatggaagtgaaattaaatctcaatggc
aactggctactcactgcatcacgtgaccacctctgtaaacttttcgatatccgaaacctg
aaagaagagcttcaagtcttccgaggtcataagaaagaagccacagctgtggcctggcat
cctgttcatgaaggactttttgccagtggagggtccgatggctctttgttattctggcat
gtcggggtagagaaggaagtgggtgggatggagatggcccatgaaggaatgatctggagt
ctggcttggcatcctcttggacatattctctgctctggttcaaatgaccatactagcaaa
ttctggacccgaaaccgaccaggtgataaaatgcgagatcgatataatctcaacctattg
cctggaatgtctgaagatggagtggaatatgatgaccttgaacctaatagcctggcagta
attccaggaatgggaataccagaacaactaaaattagctatggaacaagagcagatgggg
aaagatgaatcaaatgaaattgaaatgacaattccaggtttggactggggaatggaggag
gtgatgcaaaaggatcagaaaaaagttcctcagaaaaaagttccttatgcaaaacctatt
cccgctcagttccagcaggcttggatgcaaaataaagttccaattcctgccccaaatgag
gtactaaacgatagaaaagaggacattaaattggaagagaagaagaaaacgcaagcagaa
attgaacaagaaatggccacattacagtataccaacccacagcttctggagcaacttaaa
attgaaagacttgcacagaaacaggctgagcaaattcagccacctccttcatctggcacc
cctctcctcggaccccagccctttccaggacaaggtccaatgtctcagattcctcaaggt
tttcagcagccccatccatctcagcagatgccaatgaacatggctcaaatggggcctcca
ggtccacagggacagtttagaccccctggaccccagggacaaatgggaccacaaggtcct
ccactgcatcagggaggtggggggccacaaggattcatgggaccacaagggccccagggc
ccgccccaggggttgccgagacctcaggacatgcatgggccccaaggaatgcagaggcac
cctggacctcatggccctttgggacctcaaggaccacctggaccacagggtaattctggt
cctcaaggtcatatgggtcctcagggtccacctggcccacaaggtcacataggccctcaa
ggcccacctggtccccagggtcacttgggtcctcaggggcctcctggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaaggacctcctcatcctcatgggatacaaggt
gggccagggtctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggtcctccaggcccccgagaaaatcagggtcctgctccccaaggg
atgatgatgggccatccgcctcaagagatgagaggacctcaccctccaagtggactgctg
ggacatggccctcaggagatgcgaggccctcaggagatgcgaggcatgcaggggcctcca
gcccaagggtccatgctgggccccccccaggaattgcgagggcctccaggctcacaaggt
cagcaggggccgccccagggctctttggggcctccaccccagggtggcatgcaagggccc
cctggacctcagggacagcagaacccggcaagagggccacatccatctcaagggccaata
ccattccagcagcagaaaacagctctgctaggtgatgggccccgggcccccttcaatcag
gaaggacagaacgcaggccccccacccctgataccaggcctagggcagcagggagcacaa
ggtcgcatcccccctcttaaccctggacaaggacctggccctaacaaaggtgactcacgt
ggccctccaaaccatcacatgggccccatgtcagagaggcggcatgagcagagcagcggc
cctgagcacgggcctgagagggggcctttccggggcggccaggactgcaggggtccccct
gataggcgtggccctcaccccgacttccctgacgacttcagcagaccagatgacttccac
ccggacaagcgctttggccaccgattacgtgaatttgaggggcgaggaggacctttacca
caagaagagaagtggaggcgtgggggccccgggcctccgtttccgcctgatcacagggaa
ttcagcgagggggatggccggggagcagcccggggccctccaggggcttgggaaggccgc
agacctggagatgaacgatttccccgggatcctgaggacccacgttttcgagggcgcaga
gaagaaagctttagaagaggagcacccccaagacatgagggccgtgccccccccagagga
agggacagttttcctggtcctgaagactttggtccagaggagaattttgatccttccgat
gaagcagcccgaggaagagatctcagaggtcgaggtcggggtaccccacgaggaggaagg
aagggtttactccccactcctgatgagttccctcgctttgaaggaggacggaaaccagac
tcctgggatggaaatagagagccaggaccaggtcacgagcatttccgtgacgctcctcgc
cctgatcatccccctcatgacggtcattccccagctagcagagaacgttcctcttctctc
cagggcatggacatggcatccctgccaccccgaaagcgtccctggcatgatgggccaggg
acctcggagcacagagaaatggaagccccgggaggtccttctgaggatcgaggaggcaaa
ggccgagggggcccaggaccttcccagagagtgccaaaatccgggcgttccagctccttg
gatggagatcaccatgacggctaccacagagatgaaccttttgggggccctccaggcagc
ggtactgcttccagagggggccggagtggcagtaactggggtagagggagtaacatgaac
tctggcccaccaaggcgaggagcttcaaggggtggcggaaggggtcggtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (51)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (5)   
   Pfam (5)   
All databases (80)   

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