KEGG   Ailuropoda melanoleuca (giant panda): 100476319
Entry
100476319         CDS       T01329                                 
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aml03000]
    100476319 (SSRP1)
   03036 Chromosome and associated proteins [BR:aml03036]
    100476319 (SSRP1)
Transcription factors [BR:aml03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    100476319 (SSRP1)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     100476319 (SSRP1)
SSDB
Motif
Pfam: PH1_SSRP1-like Rttp106-like_middle SSrecog POB3_N HMG_box SSRP1_C HMG_box_2 bPH_2
Other DBs
NCBI-GeneID: 100476319
NCBI-ProteinID: XP_011227536
Ensembl: ENSAMEG00000014330
UniProt: A0A7N5KJQ2
Position
16:complement(78434153..78444327)
AA seq 709 aa
MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH
GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDE
SFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPVEVKK
GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA
EDARREYEKAMKEYEGGRGESSKRDKSKKKKKVKVKTEKKSTPSRGSSSKSSSRQLSESF
KSKEFVSSDESSSGENKNKKKRRRSEDSEEEELASTPPSSEDSASGSDE
NT seq 2130 nt   +upstreamnt  +downstreamnt
atggcggaaacactagagttcaacgacgtctatcaggaggtgaaaggctccatgaacgat
ggtcggctgaggttgagccgccagggtatcatcttcaagaatagtaagacgggcaaagtg
gacaacatccaggctggggagttgacggaaggcatctggcgccgtgtcgccctgggccac
ggacttaaactgcttacaaagaatggccatgtctacaagtatgacggcttccgagaatcg
gagtttgagaaactctcggatttcttcaaaactcactatcgccttgaactgatggagaaa
gacctctgtgtgaagggctggaactggggaacggtgaagttcggtgggcagctgctttcc
ttcgacattggcgaccagcctgtcttcgagatacccctcagcaatgtgtcccagtgtacc
accggcaagaatgaggtgacactggaattccaccagaacgatgacgcagaggtgtccctc
atggaggtgcgcttctacgtgcctcccacccaggaggatggtgtagacccagttgaggcc
tttgcccagaatgtgctgtctaaggcggatgtgatccaggccactggagacgccatctgc
atcttccgggagctgcagtgtctgactccccgaggccgttacgacattcggatctacccc
acctttctgcaccttcacggcaagaccttcgactacaagatcccctataccacggtgctg
cgtctctttttgctccctcacaaagaccagcgccagatgttcttcgtgatcagtctagat
ccccccatcaagcagggccaaacccgttaccacttcctgatcctcctcttctccaaggat
gaggacatctccttgactctcaacatgaacgaggaagaggtggagaagcgctttgagggg
cggctcactaagaacatgtcgggatccctgtacgaaatggtcagccgggtcatgaaagcg
ctggtcaaccgcaagatcacagtgccgggcaacttccaagggcactcaggggcccagtgc
atcacctgctcgtacaaggcgagctcgggactgctctaccccctggagcggggcttcatc
tacgtccacaagccacctgtgcacatccgctttgatgagatctcctttgtcaactttgcc
cgtggtaccaccaccactcgttcctttgattttgaaattgagaccaagcaaggcacccag
tataccttcagtagcattgagagggaggagtatgggaagctgtttgattttgttaatgcc
aaaaaactcaacatcaaaaaccgaggactaaaagagggcatgaacccaagctacgacgag
tacgccgactctgacgaggaccagcatgacgcgtacttggagcggatgaaggaggagggc
aagatccgggaagagaatgccaacgacagcagcgatgactccggagaagaaaccgatgag
tcattcaacccaggcgaagaggaggaagacgtggcagaggagtttgacagcaacgcctcg
gccagctcctctagtaatgagggtgacagtgaccgggatgaaaagaaacggaagcagctt
aaaaaggccaagatggccaaggaccgaaaaagccgcaagaagcctgtggaggtgaagaag
ggcaaagaccccaatgctcccaagaggccgatgtctgcctacatgctgtggctcaatgcc
agccgagagaagatcaagtcagaccatcctggcatcagtatcacggatctttccaagaag
gcaggcgagatctggaagggaatgtccaaagagaagaaagaggagtgggatcggaaggct
gaggatgccaggagggaatatgaaaaagccatgaaagaatatgaagggggccggggtgag
tcttctaagagggacaagtcaaagaagaagaagaaagtaaaagtgaagacggaaaagaaa
tcaacaccctcgagggggtcatcatccaagtcctcgtcaaggcagctaagtgagagcttc
aagagcaaagagtttgtgtccagtgatgagagctcttccggagagaacaagaacaaaaag
aagagaaggcggagtgaggactctgaagaagaggagctggccagtactccccctagctca
gaagactcggcatcaggatctgatgagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (40)   

Download RDF
DBGET integrated database retrieval system