KEGG   Ailuropoda melanoleuca (giant panda): 100477383
Entry
100477383         CDS       T01329                                 
Symbol
ABCE1
Name
(RefSeq) ATP-binding cassette sub-family E member 1
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aml03009]
    100477383 (ABCE1)
Ribosome biogenesis [BR:aml03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    100477383 (ABCE1)
SSDB
Motif
Pfam: ABC_tran RLI SMC_N AAA_21 Fer4 AAA_22 AAA Fer4_6 AAA_16 RsgA_GTPase AAA_15 AAA_29 NACHT VapE-like_dom nSTAND3 Rad17 AAA_30 SRP54 Fer4_9 Fer4_10 Fer4_2 TsaE Fer4_21 Fer4_7 Fer4_4 AAA_24 Fer4_16 AAA_5 AAA_19 Fer4_3 AAA_23
Other DBs
NCBI-GeneID: 100477383
NCBI-ProteinID: XP_002916281
Ensembl: ENSAMEG00000016596
UniProt: G1MDX2
Position
5:complement(110038784..110069027)
AA seq 599 aa
MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA
KGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMF
DEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEF
ELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKS
TGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
KNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggcggataaattaacgagaattgctattgtcaaccacgacaaatgtaaacctaagaaa
tgtcggcaggagtgcaaaaagagttgccctgtggttcgaatgggaaaattatgcatagag
gttacaccccagagcaaaatagcatggatttctgaaaccctttgtattggttgtggtatt
tgtattaagaaatgcccctttggcgccttatcaattgtcaatttaccaagcaacttggaa
aaagaaacaacacatcgatattgtgccaatgccttcaaacttcacaggttgcctatccct
cgtccaggtgaagttttgggattagttggaactaatggaattggaaagtcaactgcttta
aaaattttagcaggaaaacaaaagccaaaccttggaaaatatgacgatccacctgattgg
caagaaattttgacttacttccgtggatctgaattgcaaaattactttaccaagattctg
gaagatgacttaaaagccattatcaaacctcagtatgtagaccagattcccaaggctgca
aaggggacagtggggtctattttggaccggaaggatgaaacaaagacacaagcaattgta
tgtcagcagcttgatttaacccatctaaaagaacgaaatgttgaagatctttcaggagga
gaattgcagagatttgcttgtgctgtcgtttgcatacagaaagctgatattttcatgttt
gatgaaccttctagttacctagatgtcaagcagcgtttaaaggctgctatcactatacga
tctctaataaatccagatagatatatcattgtggtggagcatgatctaagtgtattagac
tatctctctgacttcatctgctgtttatatggcgtaccaagtgcttatggtgttgtcact
atgccttttagtgtaagagaaggcataaacatttttttggatggctacgttccaacagaa
aacttgagattcagggatgcatcacttgtttttaaagtggctgagacagcaaatgaagaa
gaagttaaaaagatgtgtatgtataaatatcctggaatgaagaaaaagatgggagagttt
gagctagcaattgtagctggagagtttacagattctgaaatcatggtgatgttgggggaa
aatggtactggtaaaacaacatttatcagaatgctcgctggaagacttaagcctgatgaa
ggaggagaagtgccggttctaaatgtcagttacaagccacagaaaatcagtccaaaatca
actggaagtgtccgacagttgctacatgaaaagataagagacgcttacactcatccacaa
tttgtgactgatgtgatgaagcctctgcagattgaaaacatcatcgatcaggaagtgcag
acattatctggtggtgaactgcagcgagtggctttagctctttgtttgggcaagcctgct
gatgtctatttaattgatgaaccatctgcgtatttggattctgagcagagattgatggca
gctcgagttgtcaaacgtttcatactccatgctaagaagacagcctttgttgtggaacat
gacttcattatggccacctatctagcagatcgagtcatcgtttttgatggcattccatct
aagaacacagtcgcaaacagtcctcagacccttttggctggcatgaataaatttttgtct
cagcttgaaatcacattcagaagagatccaaacaactataggccaagaataaacaaactc
aattcaattaaggatgtagaacaaaagaagagtggaaactactttttcttggatgactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (31)   
   Pfam (31)   
All databases (58)   

Download RDF
DBGET integrated database retrieval system