KEGG   Ailuropoda melanoleuca (giant panda): 100478167
Entry
100478167         CDS       T01329                                 
Symbol
MMP1
Name
(RefSeq) LOW QUALITY PROTEIN: interstitial collagenase
  KO
K01388  matrix metalloproteinase-1 (interstitial collagenase) [EC:3.4.24.7]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03320  PPAR signaling pathway
aml04657  IL-17 signaling pathway
aml04926  Relaxin signaling pathway
aml05171  Coronavirus disease - COVID-19
aml05200  Pathways in cancer
aml05219  Bladder cancer
aml05323  Rheumatoid arthritis
aml05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    100478167 (MMP1)
  09152 Endocrine system
   03320 PPAR signaling pathway
    100478167 (MMP1)
   04926 Relaxin signaling pathway
    100478167 (MMP1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100478167 (MMP1)
  09162 Cancer: specific types
   05219 Bladder cancer
    100478167 (MMP1)
  09172 Infectious disease: viral
   05171 Coronavirus disease - COVID-19
    100478167 (MMP1)
  09163 Immune disease
   05323 Rheumatoid arthritis
    100478167 (MMP1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    100478167 (MMP1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:aml01002]
    100478167 (MMP1)
Enzymes [BR:aml01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.7  interstitial collagenase
     100478167 (MMP1)
Peptidases and inhibitors [BR:aml01002]
 Metallo peptidases
  Family M10
   100478167 (MMP1)
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Reprolysin_5 Reprolysin_3 Reprolysin_4 Peptidase_M66 DUF4953 Peptidase_M54 Metallopep
Other DBs
NCBI-GeneID: 100478167
NCBI-ProteinID: XP_034521538
Ensembl: ENSAMEG00000010172
Position
8:complement(968130..975560)
AA seq 466 aa
MPSLLVPLLLLCGVGSLGFPTATPGAQDQDVRTVQKYLENYYNLKSDGKQIVRQRNSSLV
TEKLKQMQEFFGLKVTGKIDADTLSVMKQPXCGVPDVAQYVLTDRTPRWEHTHLTYRIEN
YTPDLPRADVDSAMEKAFRLWSNVSPLTFTKIFEGQADIMISFVWGDHYDNSPFDGPNGN
LAHAFPPGPNLGGDAHFDEDETWTNDYRNYNLYRVAAHELGHSLGLSHSTDIGALMYPNY
MYDGDVQLSQDDISAIQAIYGPSPNPVQPTGPQTPQVCDSNLVFDAITTVRGEVMFFKDR
FYMRQNPFYPEVELNFISTFWPNLPSGLQAAYEFAERDEIRFFKGDKYWAAQGQEMLYGY
PKDIYRSFGFPQTVKNIDAAVSDEESGKTYFFVANKYWRYDEYKRSMDAGYPRAIATDFP
GIGHKVDAVFQKYGFFYIVHGTTQYKFDLQTKRILSIDRVNSWFNC
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgcccagccttcttgtgccgctgctgctgctctgcggcgtggggtccctcggcttcccg
acagccaccccgggagcccaggaccaggacgtgcggacggtgcagaaatacctggaaaac
tactacaatctgaagagcgatgggaagcagatcgtaaggcagaggaacagcagcttggtg
actgagaagctgaagcaaatgcaggaattcttcgggctgaaggtgaccgggaagatagat
gctgacaccctgagtgtgatgaagcagcccnnatgtggggtgcccgacgtggctcagtac
gtcctcactgacaggaccccccgatgggagcacacacacctgacctacaggattgaaaac
tacaccccagatttgccaagagcagatgtggacagtgccatggagaaagcctttcgactc
tggagtaacgtctcgcccctgaccttcaccaagatctttgagggtcaagcagacatcatg
atatcctttgtctggggagatcactacgacaattctccctttgatggacccaacggaaac
ctcgctcatgcgtttccaccaggcccaaatcttggaggggatgctcatttcgatgaagat
gaaacatggaccaacgattacagaaattacaacctgtatcgtgtggcggcccacgagttg
ggtcattcccttggactttctcattctactgatattggggctctgatgtaccccaactac
atgtacgatggtgatgtccagctctctcaggatgacatcagtgccatccaggccatatac
ggaccttccccgaatccggtccagccaacaggcccccaaacaccacaggtgtgtgatagt
aacctagtctttgatgctatcactacagttcggggagaagtgatgttctttaaagacagg
ttctacatgcgccaaaatcccttctacccggaagttgagctcaatttcatttctactttc
tggccaaacctgccaagtggacttcaggcagcttatgaatttgctgagagagacgaaatc
cggtttttcaaaggtgataagtactgggctgctcaggggcaggaaatgctgtacggatac
cccaaggacatctacagatcctttggcttccctcaaactgtgaagaacatcgatgctgct
gtttctgacgaagaaagtggaaaaacatacttctttgttgctaacaagtactggaggtat
gacgaatataaacgatccatggatgcaggttatcccagagcgatagcaactgactttcct
gggattggccataaagttgatgctgttttccagaaatacggctttttctatatcgttcat
ggaaccacacaatacaaatttgatcttcaaactaagagaattctgagtattgacagagtt
aacagttggttcaactgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (8)   
   KEGG PATHWAY (8)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (35)   

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