KEGG   Ailuropoda melanoleuca (giant panda): 100478465
Entry
100478465         CDS       T01329                                 
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1
  KO
K06277  Rap guanine nucleotide exchange factor 1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04015  Rap1 signaling pathway
aml04510  Focal adhesion
aml04722  Neurotrophin signaling pathway
aml04910  Insulin signaling pathway
aml05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:aml00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    100478465 (RAPGEF1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100478465 (RAPGEF1)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    100478465 (RAPGEF1)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    100478465 (RAPGEF1)
 09160 Human Diseases
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    100478465 (RAPGEF1)
SSDB
Motif
Pfam: RasGEF RasGEF_N
Other DBs
NCBI-GeneID: 100478465
NCBI-ProteinID: XP_034520616
Position
7:complement(55985694..56075456)
AA seq 1374 aa
MSLNWQTAKVTTCPSFFLGIESQVTDNFGTGQEDKRCCSRYSLVNPTDVPCTSCPPATRR
HPPPVKGGDLFRSRLKPFVACCVPEASCPSRRSEHSPQAWSAVDGTHCLTAKPTTYTGHF
HDSQRSHLSSFTMKLKDKFHSPKIKRTPSKKGKPAEVSVKNAEKPVSKEATDRFLPEGYP
LPLDLEHQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVSALRYFKTIVDKMAIDKKVLE
MLPGSASKVLEAILPLVQSDPRIQHSSALSSCYSRVYQSLANLIRWSDQVMLEGVNSEDK
ETVTTVKGVIKAVLDGVKELVRLTIEKQGHPSPTSPVKPSSPACKPDSQSELPLTDREME
ILNKTSGLSQSAELLPDSTDEEVAPPKPPLPGIRVVDNSPPPALPPKKRQSAPSPTRVAV
VAPMSRATSGSSLPVGINRQDFDVDCYTQRRLSGGSHSYGGESPRLSPCSSIGKLSKSDE
QLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQIPQQVACNLSPLPESLGESG
SPFLGHPFQLPPAPGGCPQPEGTSAPGQQMDTPPALPEKKRRSAASQTTDSSGCRVSYER
HPSQYDNISEDDLQNPASVPSVPFTPFAAILPFQQGGSSASVEFVGDLTVPESTGDPEKP
PPLPEKKNKHMLAYMQLLEDYSEPQPSVFYQTPQNEHIYQQKNKLLMEVYGFNDSFSTEA
PHELAPPPALPPKQRQLASYAASSFSSVSYCVQQTKVAFTPEDSSATQGISVSVSNSFLS
RHGNLPVPSYKSVFRSYSQDFVPHNQASVQPFLPSTSSSSPHFPPVHQSQSSDLAVPTVA
SLPPSTVDGPLSSSQESNFHGNTVCLPSETSFTDSPQTPSSENTSEEAGEGEYVNLYSSG
QSSEELAHSRGESPAMKDGHPRDLSSASSAPGKESRDGDRASRSPDGSELAQSEEEVDEL
SLIDHSEIMARLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFIT
PEELIRKMAFLNPHSTYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVELTEEILKLLM
ELVFRLVCSGELSLARVLRKNILDKVDQKKLLRCANSDQPLAARGVAARPGTLHDFHSHE
IAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKA
QDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLAEYCTLIDS
SSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKRWQQFNILDSMR
CFQQAHYDIRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTDREEKT
NT seq 4125 nt   +upstreamnt  +downstreamnt
atgtccctaaattggcaaactgctaaggtgaccacatgccctagtttctttcttgggatt
gaatcccaggtaactgacaactttgggacaggacaggaggataagaggtgttgttccaga
tattcgttagttaatcctacagatgtgccctgtaccagctgcccacctgcgaccagacga
catcccccacccgtcaaaggaggtgatttgttcagaagccgattaaagccctttgtggcc
tgttgtgttcctgaagcgtcttgcccatctcggagatctgagcacagccctcaagcttgg
tcagctgtggatgggacccactgcctcacggccaagcccaccacgtacacgggtcatttc
catgactctcagcgttctcatctctcctccttcaccatgaagctgaaggacaaattccac
tcacccaaaatcaagagaacgccgtcaaagaagggaaaaccagctgaggtgtctgtgaaa
aatgcggagaagcctgtgagcaaagaggcaacagacagatttctaccagagggctaccct
ctccccttggatctggagcaccaggcagtagagtttatgtccaccagtgctgtggcttcc
aggtctcagaggcagaagaacctgagctggctggaagagaaagagaaagaagttgttagt
gccttgcgctactttaagaccattgtggacaaaatggctattgataagaaggtactggag
atgcttccagggtcagccagcaaggtgctggaggccatcttacccctggtgcagagtgat
cctcgaattcaacacagctcagccctctcctcctgctatagccgagtgtaccaaagtctc
gccaacctcatccgttggtctgaccaagtgatgctagaaggtgtgaactcagaagataaa
gagacagtgacaaccgtgaagggagtcatcaaggctgtgctggacggagtgaaggagctg
gtcagacttaccatcgagaagcaggggcatccgtctccaaccagcccagtgaaacccagt
tccccagcctgcaaacccgacagccagtctgagctccccctgacagatcgagagatggag
attctaaacaaaacaagtggcctgtcccagtcggccgagctactcccagactctacagat
gaggaggtcgcacccccaaagcctcccttacctggcattcgggtggttgataacagtcct
ccaccagcattgccaccgaagaaaagacagtcagctccatccccgacacgagtggctgtc
gttgcccccatgagtcgagccaccagtggctccagtttgcctgttggaattaataggcag
gattttgacgtggactgttacacacagaggcgactctcaggaggcagccattcgtacggc
ggagagtcgccccgcctgtccccctgcagcagcataggcaagctcagcaagtcagacgag
cagctgtcctctctggacagggacagcggccagtgctcccggaacacaagctgtgaaaca
ctagatcactatgaccctgactacgaattccttcagcaagacctctctaacgccgaccag
atacctcagcaagtggcctgtaaccttagcccgttgccggagtccttgggagagtctggc
tctccatttcttggccatcctttccagttgcctccagcacctggcggctgtccccagcca
gagggaacgtcggccccaggacagcagatggacacgccgcctgctctccccgagaagaag
cgcaggagtgcggcctcccagaccacggacagctctggctgcagggtgtcctacgagcgg
cacccctcccagtacgacaacatctccgaggatgacctgcagaacccagcctcggtcccg
tccgtccccttcacgccctttgctgctattctcccctttcagcaaggagggtcctccgcc
tctgtcgaatttgtgggtgatctcactgttcctgaatcaacgggtgacccggaaaaaccg
cctcctttaccagagaagaaaaacaaacacatgctggcctacatgcagctgctcgaggac
tactcggaaccgcagccatccgtgttctaccagacgccgcagaacgagcacatctaccag
cagaagaacaagctcctcatggaggtgtacggcttcaacgactcgttcagcaccgaggcc
ccgcacgagctggcgccgccccccgccctgccccccaagcagcggcagctggcctcctat
gctgcttcttccttctcctctgtctcctactgtgtccagcaaactaaagtggccttcacc
cccgaggacagcagtgccactcagggcatcagtgtgtccgtctctaactcctttctcagc
cggcacggcaacttgcctgtgccctcgtataaatctgtgtttaggtcctactcccaggat
ttcgtgcctcacaaccaagcttccgttcaacctttccttccgtccacctcctcttcctct
ccacatttcccacccgtccaccagtctcagagctctgacttagcggtgccaaccgtagcc
agtctgcctcccagcaccgtggacgggcctctctcatcttctcaggagagcaactttcat
gggaacactgtctgccttccttccgaaacctctttcactgactcgccccagacgccttcg
agtgaaaacaccagtgaggaggctggtgagggtgaatacgtcaatctgtattcctctggc
cagagcagcgaggagctggctcactctcgaggagaatcaccagctatgaaagacggacat
cccagagatctctcgtcggccagcagtgcacccgggaaggagagcagagacggcgacagg
gcctcaaggtcaccagatggttcagagttggctcagtcggaggaggaagtggatgagctg
tccctcatcgaccacagcgagattatggcgaggctgaccctcaagcaggagggtgacgat
gggccagacgtccgtggcgggtctggagatatcctactggtgcacgctactgagacagac
aggaaagatttggtgctgtactgtgaggccttcctgaccacctacaggaccttcatcacc
ccggaggagctcatcaggaaaatggctttccttaacccacactccacgtacgagaagttc
tcaccctttgctgacacgttcaagaagcgcgtcagcaagaacacgttcttcgtgctggtg
cgggtggtggatgagctctgcctcgtggagttgaccgaagagatcttgaagctgctgatg
gagctggtcttccgcttggtgtgcagtggggagctcagcctggcccgtgtgctccggaag
aacatcctggacaaggtggaccagaagaaactgctcaggtgtgccaactccgaccagccc
ctggcagcccggggggtagccgccaggccggggactttgcatgactttcacagccatgaa
atagccgagcagctgaccctgctggatgctgagctcttctataaaatagagattcctgag
gttttgctttgggcaaaagagcagaatgaggagaaaagccccaacttgacccagttcaca
gagcacttcaacaacatgtcatactgggtgcgctcaatcatcatgttacaggagaaagcc
caggacagggagcggctgctgttgaagttcatcaagatcatgaagcacctacggaagctg
aacaactttaactcctacctggccatcctctcggcgctggactcggctcccatccgcagg
ctggagtggcagaagcagacctcggagggcctggccgagtactgtacgctgatcgacagc
tcgtcctccttccgcgcctaccgggccgccctctccgaggtggagcccccctgtatcccg
tacctgggcctcatcctgcaggacctcacctttgttcacctgggaaacccagactatatt
gatgggaaggtgaatttttccaaacggtggcagcagttcaacattctggacagcatgcgg
tgcttccagcaagcgcactacgatatccgaagaaacgatgatatcataaacttcttcaat
gacttcagcgaccacctggcggaggaggccctgtgggaactttctctgaaaatcaaacct
aggaacataacaaggagaaaaacagaccgggaggagaagacctag

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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