KEGG   Ailuropoda melanoleuca (giant panda): 100478775
Entry
100478775         CDS       T01329                                 
Symbol
XRCC6
Name
(RefSeq) X-ray repair cross-complementing protein 6 isoform X1
  KO
K10884  ATP-dependent DNA helicase 2 subunit 1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    100478775 (XRCC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aml03041]
    100478775 (XRCC6)
   03400 DNA repair and recombination proteins [BR:aml03400]
    100478775 (XRCC6)
Spliceosome [BR:aml03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    100478775 (XRCC6)
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     100478775 (XRCC6)
SSDB
Motif
Pfam: Ku_N Ku Ku_C SAP SAP30_Sin3_bdg NpwBP
Other DBs
NCBI-GeneID: 100478775
NCBI-ProteinID: XP_019665529
Ensembl: ENSAMEG00000015579
UniProt: G1MAS4
Position
15:84148747..84177043
AA seq 607 aa
MSGWESYYKNEGNEEEEQEEGLEAGGEYTYSGRDSLIFLVDGSRAMFESQGEVELTPFDM
SIQCIQSVYTNKIISSDQDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRVLELDQF
KGEQGKKHFQDLIGHGSDYSLSEVLWVCANLFSDVRVKMSHKRVMLFTNEDDPHGDDSAK
ASRARTKAGDLRDTGIFLDLMHLRKRGGFDISLFYRDIISTAEDEDLGVHFEESSKLEDL
LRKVRAKETRKRVLQRLKFKLSKDIALTVGMYNMVQKAFKPPPVRLYRETNEPVKSKTRT
FNVNTGSLLLPSDTKRSQNYGNRQIVLEREETEELKRFDEPGLILIGFKPLIMLKKHHYL
RPSLFVYPEESLVNGSSTLFSALLTKCLEKEVMAVCRYTPRQNIPPYFVALLPQEEELDD
QKIQLTPPGFQLVFLPYADDKRRVPFTEKVLANPEQIDKMKAIVQKLRFNYRSDSFENPV
LQQHFRNLEALALDLMEPEQAVDLTLPKIEAIDRRLGSLVNEFKELVYPPDYNPEGKVPK
RKQGDEGSGSKRPKMELSAEDLRAHVSKGTLGKLTVPMLKEACRVYGLRGGLKKQELLDV
LTKHFQN
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgtcaggttgggagtcttattacaaaaacgagggcaatgaagaagaagaacaagaagag
ggccttgaagcaggtggagaatatacatattcaggaagagatagtttgatttttttggtt
gatggttctagggccatgtttgaatctcagggtgaagttgaactgactccttttgacatg
agcatccagtgtatccagagtgtgtataccaataagatcataagcagtgatcaagatctc
ttggcagtggtgttctatggtactgagaaggataaaaattcagtgaatttcaaaaatatt
tacgtcttacaggagttggataatccaggtgctaaacgagtgcttgagcttgaccagttt
aaaggggagcaggggaaaaaacatttccaagacctaattggccatggatcggactactca
ctaagtgaagtgctgtgggtctgtgccaacctctttagcgacgtccgggtcaagatgagc
cataagagggtcatgctgttcaccaatgaagatgacccccatggcgatgacagtgccaaa
gccagccgggccaggaccaaagcgggggacctccgtgacacaggtatcttcctggacttg
atgcacctgaggaaacgtgggggcttcgacatatccttgttttaccgagatatcatcagc
acagccgaggatgaggacctaggggttcactttgaggaatccagcaaactggaagacctg
ttgaggaaggttcgcgccaaggagaccaggaagcgcgtgctccagaggttgaagtttaag
ctcagcaaagatatagcgctcactgtcggcatgtataatatggtccagaaggctttcaaa
cctcctccagtgaggctttatcgggaaaccaatgaaccagtgaaatccaagacccggaca
tttaacgtaaatacgggcagtttgcttctgcctagcgacaccaagaggtctcagaactat
gggaatcgtcagattgtactagagagagaggagacagaagagctgaaacgctttgatgaa
ccaggtttgattctcatcggtttcaagcccttgataatgctgaagaaacaccattacctg
aggccctccctgttcgtgtaccctgaagagtccctggtgaacgggagctcaacgctgttc
agtgctctcctcacaaagtgtctggagaaggaggtcatggcagtgtgcagatacaccccc
cgtcagaacatccctccttattttgtggccttgttgccacaagaagaagagctggatgac
cagaaaattcagctgactcccccaggcttccagcttgtcttcttaccctatgctgacgat
aaacggagggtgccctttactgaaaaagtcttggcgaacccagagcagatagacaagatg
aaggctattgttcagaagctccgattcaactacagaagtgacagcttcgagaacccagtg
ctgcagcaacacttcaggaacctggaggcactagctttggatctcatggagcccgagcaa
gcggtggacctgaccctgcctaaaattgaagcaatagatagaagactgggctccctggtg
aatgagtttaaggagcttgtctacccaccagattacaatcctgaaggaaaagttcccaag
cggaaacaaggtgatgaaggttctggaagcaaaaggcccaagatggagttatctgcagag
gatctgagggcccacgtgagcaagggcacgctggggaagctcactgtgcccatgctgaag
gaagcctgcagggtgtatgggctgaggggcgggttaaagaagcaggaactgctggacgtg
ctcactaagcacttccagaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system