KEGG   Ailuropoda melanoleuca (giant panda): 100483409
Entry
100483409         CDS       T01329                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-18-like
  KO
K16494  protocadherin beta
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:aml04515]
    100483409
Cell adhesion molecules [BR:aml04515]
 Cadherins
  Protocadherins
   100483409
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_3 Cadherin_4
Other DBs
NCBI-GeneID: 100483409
NCBI-ProteinID: XP_034512033
Position
3:29038893..29042585
AA seq 798 aa
MEPGEIRPQQKRQVLLFFVFLGGSLVCSEPWRYSVAEEMQIGSYIGNVVKDIGLGVEDLV
VRGARVIFDDYKPYLQLDQQTGNLLLNEQLDREALCHLREPCILHFQVLFENPLQFFRAE
LWVKDINDHTPDFLDKHILLKISEGTAPGTSFQMDSAQDLDVGKNGVQNYTLSPNPYFHL
KLQDSDDGRKYPELLLDQSLDREKEPEFRLTLTALDGGSPPRSGTTLVHILVLDINDNAP
EFERPVYEVQVPENSPVDSLVVRVSATDLDAGIYGELSYSFSHVSTDIRKTFEIHSVSGE
IHLKALLDFELIQSYTINIQAIDGGSLSGKSAILVQVVDVNDNAPEIVMTSLTSPIPENS
SPEMVVAIFSVRDQDAGDNGRMVCSIQDDLPFLLKPTFKNFYTLVTEVPLDRERQAEYNI
TITVTDLGTPRLKTQLNLTVTVSDVNDNAPAFSQSSYTLRVXENNSPALHIGSVSATDRD
AGANAQVTYSLLLPPHDPHLPLASLVSINADNGQLFALRALDYEALQAFEFGVRAADRGS
PALSSQALVRVLVVDDNDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQ
NAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLLVLVKDNGEPPLSASVTL
HVLLVDGFSQPYLPLPDVAAAEARADPLTVYLVIALASVSSLFLVSVLVFVAVRLCRRSR
AASGGGCAVPEGPFAGHLVDVSGTGTLSHSYQYEVCLRGGSGTGEFKFLKPILPSFLGLG
EERISEGNPNFRDNFEFN
NT seq 2397 nt   +upstreamnt  +downstreamnt
atggagccaggagagattcgccctcagcagaaaaggcaagtgctgcttttctttgttttc
ctgggagggtctttggtgtgttcagagccctggcgctattctgtggcagaggaaatgcag
atcggctcctatataggcaatgtggtgaaagacataggtttgggtgtggaagacttggtt
gtgcgaggggcgagagtcatctttgacgactataaaccatatttacagttggatcagcag
actggcaacttgctcttaaatgagcaattggaccgggaggcactttgccatctcagagag
ccatgtatattgcatttccaggtattatttgaaaatcctttacaattttttcgggctgaa
ctttgggttaaagacataaatgatcatacccctgacttcctagacaaacacatacttctg
aaaatctcagaaggtactgctccaggaacctcatttcaaatggacagtgctcaggacttg
gatgtaggaaagaatggtgtccaaaactacacattaagtcccaatccttattttcacctt
aaattacaagacagtgatgacggcagaaaatacccagagctgttgctggaccaatctctg
gatcgagaaaaggagcctgagtttagattaacgctaacagccttggatggcggttctccg
cctaggtctggaactacactggttcacattttggttttagatatcaatgacaatgctcca
gagttcgagcggcctgtctatgaggttcaggtaccagaaaacagccctgttgactccttg
gtcgtcagggtgtctgctacagatttggatgcaggaatatatggagaactatcttactca
ttttcccacgtctccacagacatacggaaaacatttgaaatccattcagtttctggtgaa
atccatttaaaagcgcttctggattttgagttaattcagtcatatacaataaatattcag
gccattgatgggggtagcctttccggaaaatcagcaattttagttcaggttgtggatgtg
aatgacaacgcaccagaaatagtcatgacatctcttaccagccccatacctgaaaattcg
tcacctgaaatggtggtcgctatttttagcgtacgagaccaagacgctggggacaacggg
aggatggtgtgctccattcaggatgacctcccttttctcttgaagcctaccttcaagaat
ttctacaccctggtaacagaggtaccactggacagagaaagacaagccgagtacaacatc
accatcaccgtcaccgacttggggacgcccaggctgaaaacccaactcaacttaaccgtg
acggtgtccgacgtcaacgacaacgcccccgccttcagccaaagctcctacaccctgcgg
gtcnncgagaacaacagccccgccctgcacatcggcagcgtgagcgccaccgacagagac
gcgggcgccaacgcccaggtcacctactcgctgctgctgccgccccacgacccgcacctg
cccctggcctcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcagggcg
ctggattacgaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcg
cccgcgctcagcagccaggcgctggtgcgcgtgctggtggtggacgacaacgacaacgcg
cccttcgtgctgtacccgctgcagaacggctcggcgccctgcaccgagctggtgcccagg
gcggccgaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccag
aacgcctggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgg
gcgcacaacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaagcac
aggctgctggtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctg
cacgtgctgctggtggacggcttctcgcagccctacctgccgctgccggacgtggcggcg
gccgaggcccgggccgacccgctcaccgtctacttggtcatcgccttggcgtcggtgtcg
tcgctcttcctggtgtcggtgctggtgttcgtggcggtgcggctgtgcaggaggagccgg
gcggcgtcggggggcggctgcgcggtgcccgaaggcccgtttgcgggccacctggtggac
gtcagcggcacggggaccctgtcccacagctaccagtatgaggtgtgtctgaggggaggc
tcagggactggcgagttcaagttcctcaagccaattctccccagtttccttggtctgggt
gaggagaggattagtgaaggaaaccccaatttcagggataattttgaattcaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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