KEGG   Ailuropoda melanoleuca (giant panda): 100484832
Entry
100484832         CDS       T01329                                 
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X2
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    100484832 (XRCC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aml03400]
    100484832 (XRCC5)
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     100484832 (XRCC5)
SSDB
Motif
Pfam: Ku_N Ku Ku_PK_bind Ku_C VWA_2
Other DBs
NCBI-GeneID: 100484832
NCBI-ProteinID: XP_002913725
Ensembl: ENSAMEG00000003422
UniProt: G1L9U0
Position
2:178498284..178587527
AA seq 733 aa
MARSGSKAAVVLCMDVGPAMSNSLAGEESPFELAKKVMTMFLQRQVFAESRDEIALVLFG
TDGTENALGGKDQYQNITVHRHLMLPDFDLLEDIERKIQPSSQQADFLDALVVCMDMIQR
ETVGKKFEKKHIEVFTDLSSPFSKDQLDVIIHNLKKFGISLQFFLPFPVGKEDGTGDRGD
GNSHSDHHGPSFPLKGITEQQKEGIRMVKKVMLSLEGEDGLDEIYSFSESLRQLCVFKKI
ETRSVPWPCTLTIGSNLSINIVAYKSIVQERVKKSWTVVDAQTLKKEDLQKETIYCLNDD
NETEVPKEDTIQGFRYGSDIVPFSKVDEEHMKYKSEGKCFSVLGFCRSSQVHRRYFMGNQ
VLKVFAAKDDEAAAVALSSLIHALDELAMVAVVRYVYDRRANPQVGMAFPYIKDAYECLI
YVQLPFMEDLRQYMFSSLKNNKKYIPTEAQLSAVDALIDSMSLVKKDEKEDTIEDLFPTS
KIPNPQFQRLFQCLLHRALHPQEPLPPIQQHILNMLDPPTEVTAKCQIPLSKIKTAFPLT
EAIKKKDQVTAQNIFQDNHEEGPTSKKLKTEEREACFSISSLAEGSVTSVGSVNPAENFR
VLVRQKKATFEEASRQLINCIEQFLDTNETPYFMKSMDCITVFRKEAIQFSEEQRFNDFL
KALREKVEMKQLNHFWEIVVQDGITLITKDEAPGSSITAEEAKKFLAPKENPSEDTAAVF
AEGGDVDDLLDLI
NT seq 2202 nt   +upstreamnt  +downstreamnt
atggcgcggtccgggagtaaggcagctgtcgtactatgtatggatgtgggccctgccatg
agtaactcccttgctggtgaagaatccccatttgaactagcaaagaaggtgatgaccatg
tttttgcagcgacaggtgtttgctgagagcagggatgaaattgcactagtcctttttggt
acagatggcactgagaatgcccttggtggtaaggatcagtatcagaacatcacagtgcac
agacaccttatgctaccagattttgacttgctggaggacattgaaagaaaaatccaacca
agttctcaacaagctgacttcctggatgcactcgttgtgtgcatggatatgattcaacga
gaaaccgtaggaaagaagtttgagaagaagcatattgaagtgttcactgacctcagcagc
ccattcagcaaagatcagctggatgttataatccataacttgaagaaatttggcatctcc
ctgcagttctttttgcctttccccgttggcaaggaggatggaaccggggacaggggagat
ggtaactcacactcagaccaccatggaccctcctttcctctaaaaggaattactgagcag
caaaaagaaggtattcggatggtgaaaaaggtgatgttgtctttagaaggtgaagatggg
ctagatgaaatttattccttcagtgagagtctgagacaactgtgtgtctttaagaaaatt
gagacgcgttctgtcccttggccctgcacactgaccattgggtccaatttgtctatcaac
atcgtggcttataaatcgattgtacaggagagagttaaaaagtcttggacagttgtggac
gcccaaaccctcaagaaagaagatctacagaaagaaaccatttattgcttaaatgacgac
aatgaaacagaggtcccgaaggaggacactattcaagggttccgctatggaagtgatatc
gttcctttctctaaagtggatgaggaacacatgaaatataaatcggaggggaagtgcttc
tccgttttgggattttgtagatcttctcaggtccacaggagatattttatgggaaatcaa
gtccttaaagtctttgcagcaaaagatgatgaggcagcagccgtggcgctctcctccctg
attcatgctttggatgaattagccatggtggccgtagttcgatatgtctatgacagaaga
gctaatcctcaagttggcatggcctttccttatatcaaggacgcctatgagtgtttaata
tacgtgcaactgccttttatggaagacttgcgacaatacatgttttcatctttgaaaaat
aataagaaatacattcccacagaggctcagttgagtgctgttgatgccctgattgactcc
atgagcttggtaaagaaagatgaaaaggaggacaccattgaagacttgttcccaaccagc
aaaatcccaaatcctcaatttcagagattatttcagtgtctgctgcatagagctttacat
ccccaggagcctctgcccccaattcagcagcatattttgaatatgctggacccccccact
gaggtgacagctaaatgtcagattccactctctaaaataaagactgctttccctctgact
gaagccatcaagaaaaaggatcaagtgactgctcagaacattttccaagacaaccatgaa
gagggacccacctctaaaaaactgaagactgaggaaagggaggcctgcttcagcatctcc
agcctggcagaaggcagtgtcaccagtgttggaagtgtgaatcctgctgaaaacttccgt
gttctagtgaggcagaagaaagccacctttgaggaagcaagtcgccagctaataaattgc
attgaacagtttctggatactaatgaaacgccgtattttatgaagagcatggattgcatc
acagtcttccggaaagaagccattcagttttcagaagagcagcgctttaacgatttcctg
aaagcccttcgagagaaagtggaaatgaaacagttaaatcatttctgggaaattgtcgtt
caggatggaattactctgatcaccaaagatgaagcccctggaagttccatcacagccgag
gaagccaaaaagtttctggcccctaaagaaaatccaagtgaagacacagcggccgtattt
gcagaaggtggtgacgtggatgatttactggacctgatctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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