KEGG   Ailuropoda melanoleuca (giant panda): 109488327
Entry
109488327         CDS       T01329                                 
Symbol
PCDHB10
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-10
  KO
K16494  protocadherin beta
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:aml04515]
    109488327 (PCDHB10)
Cell adhesion molecules [BR:aml04515]
 Cadherins
  Protocadherins
   109488327 (PCDHB10)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_3
Other DBs
NCBI-GeneID: 109488327
NCBI-ProteinID: XP_002912649
Position
3:29010007..29013373
AA seq 799 aa
MEAGTLCCPRQRQVLFLFLFGGVSLAGSGFGRYSVTEETERGSFVVNLAKDLGLGDQELV
ARGVRVVSDDNKQHLLLDSQTGDLLTNEKLDREKLCGLTEPCVLYFQILMDNPFQIYRAE
LRVRDINDHSPMFRDQETVLKILESTAEGTAFRLERAEDADGGLNGIQSYTINLNSFFHI
KISDSDEGMIYPELVLDKALDREKQHELTLTLTALDGGSPPRSGTTTIRIVILDINDNAP
QFSQTIYETQAPENSPVGSLIAKVSAGDVDSGVNADISYSLFDASEDIRTTFQINPFSGD
IVLIVLLDYELVKSYKINVQAMDGGGLTATCTVFVEVLDINDNPPELIISSFSNYVAENS
PETVLAVFRIKDRDSGENGKMLCYIQDNLPFLLKPSVENFYILMTEGGLDRESQAEYNIT
ITVTDLGTPRLKTQHNLSVTVSDVXDNAPAFSQSSYTLRVRENNSPALHIGSVSATDRDA
GANAQVTYSLLLPPHDPHLPLASLVSINADNGQLFALRALDYEALQAFEFGVRAADRGSP
ALSSQALVRVLVVDDNDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQN
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLLVLVKDNGEPPLSASVTLH
VLLVDGFSQPYLPLPDVAAAEARADPLTVYLVIALASVSSLFLVSVLVFVAVRLCRRSRA
ASGGGCTVPEGPFAGHLVDVSGTGTLSHSYQYEVCLRGGSGTGEFKFLKPILPNIQAQSS
GRNSEENPTFRNSFGFNFQ
NT seq 2400 nt   +upstreamnt  +downstreamnt
atggaggctggaacgttgtgctgcccaagacaaaggcaagtcctatttctctttctgttt
gggggagtatccttggcaggttctgggtttggacgatattcggtaacagaggaaacagag
agaggatcatttgtggtcaatctggcaaaggatctggggctgggggaccaggagttggtt
gcaaggggagtccgggtggtctctgatgataacaaacaacacctgctcctggattctcag
actggagatttgctcacgaatgagaaactggaccgggagaagctgtgtggcctcacagag
ccctgtgtgctgtatttccaaatcttaatggataacccctttcagatttaccgggctgag
ctgagggtcagggacataaatgatcattcaccaatgtttcgggaccaagagacagtctta
aaaatattagaaagcacagctgaagggacggcatttcgactagaaagagcagaggatgca
gatggaggacttaatggtatccaaagctacaccatcaacctgaactcttttttccatatt
aaaattagtgacagtgatgaaggcatgatatatccagagctagtgttggataaggcactg
gatcgggagaagcagcatgagctcactttaacactcacggcactggatggtgggtctcca
cccaggtctgggaccaccacaatacgaattgtgatcctggacatcaacgataatgccccc
cagttttctcagacaatctatgagacccaggccccagagaacagcccagtagggtccctt
attgcaaaagtctctgcgggagatgtagattctggagtcaatgcagacatatcctattca
cttttcgatgcttctgaagatatacgaacaacctttcaaatcaatcctttttctggggac
attgttctcatagtgttgctggattatgagctagtaaagtcttacaaaataaatgtacag
gcaatggatggagggggccttactgcgacatgtacagttttcgtggaggtattagacatc
aatgacaatccccctgaactgatcatatcatcattttccaactatgttgctgagaattct
cctgagaccgtactggctgtttttagaattaaagacagagattctggagaaaatggaaag
atgctttgctacattcaagataatctgccattccttctaaaaccctctgtggaaaatttt
tacatcctaatgacagaaggagggctggacagagagagccaggccgagtacaacatcacc
atcaccgtcaccgacctggggacccccaggctgaaaacccagcacaacttaagcgtgacg
gtgtccgacgtcnncgacaacgcccccgccttcagccaaagctcctacaccctgcgggtc
cgcgagaacaacagccccgccctgcacatcggcagcgtgagcgccaccgacagagacgcg
ggcgccaacgcccaggtcacctactcgctgctgctgccgccccacgacccgcacctgccc
ctggcctcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcagggcgctg
gattacgaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcgccc
gcgctcagcagccaggcgctggtgcgcgtgctggtggtggacgacaacgacaacgcgccc
ttcgtgctgtacccgctgcagaacggctcggcgccctgcaccgagctggtgcccagggcg
gccgaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaac
gcctggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcg
cacaacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaagcacagg
ctgctggtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctgcac
gtgctgctggtggacggcttctcgcagccctacctgccgctgccggacgtggcggcggcc
gaggcccgggccgacccgctcaccgtctacttggtcatcgccttggcgtcggtgtcgtcg
ctcttcctggtgtcggtgctggtgttcgtggcggtgcggctgtgcaggaggagccgggcg
gcgtcggggggcggctgcacggtgcccgagggcccgtttgcgggccacctggtggacgtc
agcggcacgggaaccctgtcccacagctaccagtatgaggtgtgtctgaggggaggctca
gggaccggcgagttcaagttcctcaagccaattctccccaatatccaggcacagagctct
gggaggaatagtgaagaaaatcccacctttcgaaatagctttggatttaattttcagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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