KEGG T02190: AMES

Amycolatopsis mediterranei S699: AMES_0006

Entry

AMES_0006         CDS       T02190

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

amm Amycolatopsis mediterranei S699

Brite

KEGG Orthology (KO) [BR:amm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amm03032]
    AMES_0006 (gyrB)
   03400 DNA repair and recombination proteins [BR:amm03400]
    AMES_0006 (gyrB)
Enzymes [BR:amm01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AMES_0006 (gyrB)
DNA replication proteins [BR:amm03032]
Prokaryotic type
  DNA Topoisomerases
   AMES_0006 (gyrB)
DNA repair and recombination proteins [BR:amm03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AMES_0006 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

AFO73543

Position

6668..8635

AA seq 655 aa
MTENKHEYNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLVQEVVDNSVDEAMAGHATK
VEVTLLADGGVRVVDDGRGIPVDMHPKEQKPTLEVVLTVLHAGGKFDSDSYAVSGGLHGV
GVSVVNALSKKLLAEVKYGGRSWRQEYTDQIPGPLEDLGPASETGTTITFWADGDIFETT
TYNFETISRRLQEMAFLNKGLTLSLRDERVADEEAEADAEGKVARVKEKTYCYPGGLEDF
VKHINGSKDPIHSSVISFEAKGTGLEVEVAMQWNNGFTPSVYTFANTINTHEGGTHEEGF
RAALTRVVNTYARDKKLLKEKDTNLTGDDVREGLAAIVSIKLSEPQFEGQTKTKLGNSEA
KTFVQQTSNEWLADWFERNPTEAKTIINKSISSAQARMAARKARDLVRRKGALDIGGLPG
KLKDCRSTKPEECELYIVEGDSAGGSAKEGRDSMYQAILPIRGKIINVEKARIDRVLKNT
EVQSLITALGTGIHDEFDLEKLRYHKIVLMADADVDGQHITTLLLTLLFRFMTPLIEHGH
VFLSRPPLYKIKWPRAEPEYAYSDRERDAVIQAGVEAGKRLPKDDAIQRYKGLGEMNAEE
LWETTMDPANRLLGQVTLDDAAQADELFSVLMGEDVEARRSFITRNAKDVRFLDV

NT seq 1968 nt +upstreamnt +downstreamnt
gtgaccgagaacaagcacgagtacaacgcgtcgtcgatcacggtgctcgaaggcctcgaa
gcggtccgcaagcgccccggcatgtacatcggttccaccggtgaacgcggcctgcaccac
ctcgtccaggaggtcgtcgacaactccgtcgacgaggcgatggccgggcacgccaccaag
gtcgaggttaccctcctcgccgacggcggcgtccgcgtcgtcgacgacggccgcggtatc
ccggtcgacatgcaccccaaggagcagaagccgaccctcgaggtcgtgctcaccgtcctc
cacgcgggcggcaagttcgacagcgactcctacgcggtgtccggcggcctgcacggcgtc
ggtgtctcggtggtgaacgcgctgtcgaagaagctgctcgccgaggtcaagtacggcggc
cgcagctggcgccaggagtacaccgaccagatccccggcccgctcgaggacctcggcccg
gcgagcgagaccggcaccacgatcaccttctgggccgacggcgacatcttcgagaccacg
acgtacaacttcgagaccatctcgcgccggctccaggagatggcgttcctcaacaaggga
ctgacgctgtccctgcgcgacgagcgcgtcgccgacgaggaggcggaggcggacgccgag
ggcaaggtcgcgcgggtcaaggagaagacctactgctacccgggtggcctcgaggacttc
gtcaagcacatcaacggcagcaaggacccgatccactccagcgtgatctccttcgaagcg
aagggcaccggcctcgaggtcgaggtcgcgatgcagtggaacaacggcttcacgccgtcg
gtctacacgttcgccaacacgatcaacacccacgagggcggcacccacgaagagggcttc
cgcgccgcgctgacccgcgtcgtcaacacctacgcgcgcgacaagaagctgctcaaggag
aaggacaccaacctgaccggtgacgacgtgcgcgagggcctcgccgcgatcgtctcgatc
aagctgtccgagccgcagttcgagggccagaccaagaccaagctgggcaacagcgaggcc
aagacgttcgtgcagcagacgtcgaacgagtggctggccgactggttcgagcgcaacccc
accgaggcgaagacgatcatcaacaagtcgatctcctcggcgcaggcccggatggccgcg
cgcaaggcgcgtgacctggtccgccgcaagggcgcgctcgacatcggcggcctgcccggc
aagctgaaggactgccgctccaccaagccggaggagtgcgagctctacatcgtcgagggt
gactcggccggcggctccgccaaggagggccgcgactcgatgtaccaggcgatcctgccg
atccgcggcaagatcatcaacgtcgagaaggcccgcatcgaccgcgtcctcaagaacacc
gaggtccagtcgctgatcaccgcgctcggcaccggcatccacgacgaattcgacctcgag
aagctgcgctaccacaagatcgtgctgatggccgacgccgacgtcgacggccagcacatc
accacgctgctgctcaccctgctgttccggttcatgacgccgctgatcgagcacggccac
gtcttcctctcgcggccgccgctgtacaagatcaagtggccgcgggccgagccggagtac
gcgtactccgaccgcgagcgcgacgccgtcatccaggcgggcgtcgaggccggcaagcgg
ctgccgaaggacgacgcgatccagcgctacaagggtctcggcgagatgaacgccgaagag
ctgtgggagaccacgatggacccggccaaccggctgctgggccaggtcaccctcgacgac
gccgcccaggccgacgagctgttctcggtcctgatgggcgaggacgtcgaggcccgccgc
tcgttcatcacgcgcaacgccaaggacgtgcgcttcttggacgtgtag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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