KEGG   Amycolatopsis mediterranei S699: AMES_6163
Entry
AMES_6163         CDS       T02190                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
amm  Amycolatopsis mediterranei S699
Pathway
amm00470  D-Amino acid metabolism
amm00550  Peptidoglycan biosynthesis
amm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:amm00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AMES_6163 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AMES_6163 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:amm01011]
    AMES_6163 (murD)
Enzymes [BR:amm01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     AMES_6163 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:amm01011]
 Precursor biosynthesis
  Amino acid ligase
   AMES_6163 (murD)
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N AlaDh_PNT_C TrkA_N ADH_zinc_N Shikimate_DH XdhC_C NAD_binding_7 2-Hacid_dh_C AdoHcyase_NAD Sacchrp_dh_NADP 3HCDH_N Pyr_redox
Other DBs
NCBI-ProteinID: AFO79699
Position
complement(6936310..6937719)
AA seq 469 aa
MKDIAGSHVLVAGAGVTGKSVVPVLVELGARVTVTDGNAERLAELEGLGAELVPGLTEPP
SDVVLVVTSPGWRPTSPLLVAAAEAGVEVIGDVELAWRVGRLREHPPSWLVVTGTNGKTT
TVGMLESILNAAGSNAVACGNIGYAALDAVRAGYDVLAVELSSFQLHWSSTLAPDAAAVL
NLAEDHIDWHGSMDEYAAAKGRVYTRAKVAVHNADDDWSTRIAAEHAPEGTPRVGFQLDT
PRAGELGVVEDLLVDRAFVADPENSAEALATLADVRPAGPHNVANALAAAALARAHGVSP
DAVAKGLREYQPAPHRAVEVAEVAGVRYVNDSKATNPHAAAGSLRAHASIVWIAGGQLKG
ASVDELVSSIAGRLRGVVLLGVDSPVIAAAVARHAPDVPVNSLRPGDDEPMTAAVSAASA
MARPGDVVLLAPAAASLDMFSSYGERGDAFAAAVRVLRDDAAGEPSDDS
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgaaagacatcgccggttctcacgttctcgtcgccggggccggggtcaccggcaagtcg
gtggtgccggtgctggtcgagctgggtgcgcgggtcaccgtcaccgacggcaacgccgag
cgcctggccgagctcgagggcctcggcgccgagctggtgccgggcctgaccgagccgccg
tccgacgtcgtcctggtcgtcaccagcccgggctggcggccgacgtcgccgctgctcgtg
gccgccgccgaggcgggcgtcgaggtgatcggggacgtcgagctggcctggcgcgtcggc
cggctgcgcgagcacccgccgtcctggctggtggtgaccggcaccaacggcaagacgacc
accgtgggcatgctcgaatcgatcctcaatgccgccggcagcaacgccgtggcctgcggg
aacatcggctacgcggcgctcgacgcggtccgggcgggctacgacgtgctggccgtggag
ctgtcgagcttccagctgcactggtcctcgacgctggcgccggacgccgccgcggtgctg
aacctggccgaagaccacatcgactggcacggctcgatggacgagtacgcggccgcgaag
ggccgggtctacacccgcgccaaggtcgccgtgcacaacgccgacgacgactggtccacc
cggatcgccgccgagcacgccccagaaggtaccccccgcgtcggcttccagctcgacacc
ccgcgcgccggcgagctgggcgtggtcgaggacctgctggtcgaccgcgctttcgtcgcc
gacccggagaacagcgccgaggcgctggccaccctcgccgacgtccgtccggcgggcccg
cacaacgtcgccaacgccctcgccgcggccgcgctcgcccgcgcccacggcgtgtcgccg
gacgccgtggcgaagggcctgcgcgagtaccagccggccccgcaccgggccgtggaggtc
gccgaggtggccggggtgcggtacgtcaacgactcgaaggcgaccaacccgcacgcggcc
gccgggtccctgcgggcccacgcgagcatcgtgtggatcgccgggggccagctcaagggc
gcgtcggtcgacgagctggtgagcagcatcgccggccgtctccgcggagtcgtgctcctc
ggcgtcgattcacccgtgatcgccgccgcggttgcgcgacacgcgccggatgtcccggtg
aacagcctccgtccgggtgacgatgaacccatgactgcggcggtgagtgcggccagcgcg
atggcccgacccggtgacgtggtgctgctggcacccgccgcggcgtcgttggacatgttc
tcgagctacggcgagcgcggcgacgcgttcgccgcggccgtgcgtgtcctccgcgacgac
gcagcgggggagccgagtgacgacagctga

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