KEGG   Amycolatopsis mediterranei S699: AMES_8423
Entry
AMES_8423         CDS       T02190                                 
Symbol
groE
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
amm  Amycolatopsis mediterranei S699
Pathway
amm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AMES_8423 (groE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amm03019]
    AMES_8423 (groE)
   03110 Chaperones and folding catalysts [BR:amm03110]
    AMES_8423 (groE)
   03029 Mitochondrial biogenesis [BR:amm03029]
    AMES_8423 (groE)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amm04147]
    AMES_8423 (groE)
Enzymes [BR:amm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     AMES_8423 (groE)
Messenger RNA biogenesis [BR:amm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AMES_8423 (groE)
Chaperones and folding catalysts [BR:amm03110]
 Heat shock proteins
  HSP60 / Chaperonin
   AMES_8423 (groE)
Mitochondrial biogenesis [BR:amm03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    AMES_8423 (groE)
Exosome [BR:amm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AMES_8423 (groE)
  Exosomal proteins of other body fluids (saliva and urine)
   AMES_8423 (groE)
  Exosomal proteins of breast cancer cells
   AMES_8423 (groE)
  Exosomal proteins of colorectal cancer cells
   AMES_8423 (groE)
  Exosomal proteins of bladder cancer cells
   AMES_8423 (groE)
SSDB
Motif
Pfam: Cpn60_TCP1 CbiA MukB_hinge
Other DBs
NCBI-ProteinID: AFO81955
Position
complement(9401374..9403002)
AA seq 542 aa
MAKLIAFDEDARRGLERGLNILAEAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPWEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGADPISLKRGIE
AAVEAITEQLHKAAVQIETKEQIAATASISAADRTIGELIAEALDKVGKEGVVTVEESNT
FGLELELTEGMRFDKGYISGYFVTDPERQEAELEDPYILLFGSKISTVKDVLPLLEKVIQ
SGKPLLIIAEDVEGEALATLIVNKMRGTFKSVAVKAPGFGDRRKAILQDIAILTGGQVIS
EDVGLKLENADLSLLGKARKAVITKDETTIVEGAGDADQIQGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
AEAAFAGLKLEGDEATGANIVKVAVEAPLKQIAINAGLEGGVVVEKVKGLPQGHGLNAAT
GVYEDLLAAGVPDPTKVTRSALQNAASIAALFLTTEAVVADKPEKASAAPADPSGGMGGM
DF
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggccaaactgatcgcgttcgacgaggacgcccgccgcggtctcgagcgtggcttgaac
atcctcgccgaagccgtcaaggtgaccctcggcccgcggggccggaacgtcgtgctcgaa
aagaagtggggcgcgccgaccatcaccaacgacggcgtctccatcgccaaggagatcgag
ctcgaagacccgtgggagaagatcggggccgagctcgtcaaggaagttgccaagaagacc
gacgacgtcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggccctggtcaag
gaaggcctgcgcaacgtcgcggccggcgctgaccccatcagcctgaagcgcggcatcgag
gcggccgtcgaggccatcaccgagcagctgcacaaggccgccgtccagatcgagaccaag
gagcagatcgctgctaccgcctcgatctcggccgctgaccgcaccatcggcgagctgatc
gccgaggcgctggacaaggtcggcaaggaaggcgtcgtcaccgtcgaggagagcaacacc
ttcggtctcgagctcgagctcaccgagggcatgcgcttcgacaagggctacatctccggt
tacttcgtgaccgacccggagcgtcaggaagccgagctcgaggacccgtacatcctcctc
ttcggctccaagatctccaccgtcaaggacgtgctgccgctgctggagaaggtcatccag
tccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctggccaccctc
atcgtcaacaagatgcgcggcaccttcaagtccgtcgccgtcaaggcgccgggcttcggt
gaccgccgcaaggcgatcctgcaggacatcgcgatcctgaccggtggccaggtcatctcc
gaggacgtcggcctcaagctggagaacgcggacctgtccctgctgggcaaggcccgcaag
gccgtcatcaccaaggacgagacgaccatcgtcgagggtgcgggcgacgccgaccagatc
cagggtcgcgtcaaccagatccgcgccgagatcgagaactcggactcggactacgaccgc
gagaagctgcaggagcggctcgcgaagctggccggcggcgtggccgtcatcaaggccggc
gccgcgaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgcggtgcgcaac
gcgaaggccgccgtggaagagggcatcgtcgccggtggtggcgtggccctgatccaggcc
gccgaggccgcgttcgcgggcctgaagctcgagggcgacgaggccactggcgccaacatc
gtcaaggtggccgtcgaggccccgctcaagcagatcgcgatcaacgccggcctcgagggc
ggcgtcgtggtggagaaggtcaagggcctgccgcagggtcacggcctcaacgccgccacg
ggtgtctacgaggacctgctcgccgccggcgtgccggacccgacgaaggtcacccgctcc
gcgctgcagaacgccgcgtccatcgcggcgctgttcctgaccaccgaggccgtcgtggcg
gacaagccggagaaggcttcggccgctcccgccgacccgtccggtggcatgggtggcatg
gacttctga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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