KEGG   Amycolatopsis mediterranei S699: RAM_13050
Entry
RAM_13050         CDS       T01822                                 
Name
(GenBank) RNA polymerase sigma factor SigB
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
amn  Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:amn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amn03021]
    RAM_13050
Transcription machinery [BR:amn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RAM_13050
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AEK41100
UniProt: A0A9R0U819
Position
complement(2735665..2736618)
AA seq 317 aa
MSLGALTDADLDAQSPAADLVRVYLNGIGKTALLSAADEVELAKRIEAGVFAQHMLDTGE
NLTTKRRTELAALVRDGHVAKNHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRA
VEKFDYSKGFKFSTYATWWIRQAITRGMADQGRTIRLPVHLVEQVNKLARIKRDLHQQLG
RDATHEELAAESGIPAHKISDLLDHSRDPVSLDMPVGTEEDAPLGDFIEDSEATDAESAV
ISGLLQDDLRRVLATLDDREQHVIRLRYGLDDGQPRTLDQIGKHFGLSRERVRQIEREVM
SKLRQGERADRLRAYAS
NT seq 954 nt   +upstreamnt  +downstreamnt
atgagcctgggggcgctcaccgacgccgacctcgacgcccagagccccgccgccgacctc
gtgcgtgtctacctcaacggtatcggcaagacggccctgctgtccgcggccgacgaggtc
gagctggccaagcgcatcgaagccggcgtgttcgcccagcacatgctggacaccggggag
aacctcaccaccaagcgccgcaccgagctggccgcgctggtccgcgacggccacgtggcc
aagaaccacctgctggaggccaacctccgcctcgtggtctcgctcgccaagcgctacacc
ggccggggcatgccgctgctggacctgatccaggaggggaacctgggtctgatccgcgcg
gtggagaagttcgactactccaaggggttcaagttctcgacctacgccacctggtggatc
cggcaggccatcacccggggcatggccgaccagggccgcaccatccggctgcctgtccac
ctggtggaacaggtcaacaagctggcccgcatcaagcgcgacctgcaccagcagctcggc
cgcgacgcgacgcacgaggagctggcggccgagtcgggcatcccggcgcacaagatctcg
gacctgctcgaccactcgcgtgacccggtaagcctggacatgccggtcggcaccgaggag
gacgccccgctgggcgacttcatcgaggactccgaggccaccgacgccgagagcgccgtg
atctcgggcctgctgcaggacgacctgcgccgtgtcctggcgacgctggacgaccgcgag
cagcacgtgatccgcctgcgctacggcctcgacgacggccagccgcgcacgctcgaccag
atcggcaagcacttcgggctgtcccgcgagcgcgtccgccagatcgagcgcgaggtcatg
tcgaagctgcgccagggcgagcgcgcggaccggctccgcgcctacgcgagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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