KEGG   Amycolatopsis methanolica: AMETH_6146
Entry
AMETH_6146        CDS       T03230                                 
Symbol
fadD
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
amq  Amycolatopsis methanolica
Pathway
amq00061  Fatty acid biosynthesis
amq00071  Fatty acid degradation
amq01100  Metabolic pathways
amq01212  Fatty acid metabolism
amq02024  Quorum sensing
Module
amq_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:amq00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    AMETH_6146 (fadD)
   00071 Fatty acid degradation
    AMETH_6146 (fadD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AMETH_6146 (fadD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:amq01004]
    AMETH_6146 (fadD)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amq04147]
    AMETH_6146 (fadD)
Enzymes [BR:amq01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     AMETH_6146 (fadD)
Lipid biosynthesis proteins [BR:amq01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   AMETH_6146 (fadD)
Exosome [BR:amq04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   AMETH_6146 (fadD)
  Exosomal proteins of breast cancer cells
   AMETH_6146 (fadD)
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: AIJ26238
UniProt: A0A076N071
Position
6343718..6345352
AA seq 544 aa
MMSVYDDRPWLARYAPGQPAGITVEHESALAMFRASVARDPDGDILRYFGGRITLRELDE
LTDAFAAGITDAGFRPGERVAIYAQNVPQFVIAQVGTWKAGGIAVSVNPMNRGRELGQLL
ADSGATVLVTLQSLWHEVAAEVVPGTAVRTVLTTSELEYRAEPGSPVECPGTVDLAGMLA
RFRGVAPPSVTLGPDDIAFLTYTSGTTGPPKGAMTTHRNVVFNAQTYRDWVGLSEDDVIL
GVAPLFHITGLIGHIAVALLVGAPLVLMHRFDAARTVETVRAERATFTVGSITVFIALMN
VPDVDRDALASLRKIYSGGAPIPPSTVKAFQAMFGTYIHNCYGLTETTSPSHAVPFGVEA
PVDPASGALSVGVPVYDTVVRVVDEDGRELPAGEVGELVTSGPQVVAGYWEKPAEAEKAL
PGGRLYTGDVGYMDAEGWFYVVDRKKDQINAGGYKVWPREVEDVLYEHEAVREAAVVGVP
DEYRGETVKAFVSLRPGFSVTAEELISFCRQRMAAYKYPRQVEFLEELPKTVSGKLLRRA
LRGG
NT seq 1635 nt   +upstreamnt  +downstreamnt
gtgatgagcgtctacgacgacaggccgtggctggcgcggtacgcgccggggcaaccggcg
gggatcaccgtcgagcacgagagcgcgctggcgatgttccgggcgtccgtggcgcgtgat
ccggacggggacatcctgcggtacttcggtggtcgcatcacgctgcgcgagctggacgag
ctgaccgacgcgttcgccgcgggcatcaccgacgccgggttccgtcccggcgagcgcgtc
gcgatctacgcgcagaacgtgccgcagttcgtgatcgcgcaggtcggcacgtggaaggcg
ggcgggatcgcggtgtcggtcaacccgatgaaccgcggacgcgaactggggcagctgctg
gccgattcgggcgcgacggtgctggtgacgttgcagtcgctgtggcacgaggtggcggcg
gaggtggtgccggggacggcggtgcggacggtgctgacgacgtccgaactggagtaccgc
gcggagcccggttcgccggtggagtgcccgggaaccgttgacctggcggggatgctggcg
cggttccggggcgtggcgccaccgtcggtgacgctcggaccggacgacatcgcctttctg
acctacacctcgggcacgacgggcccgccgaagggcgccatgacgacgcaccgcaacgtc
gtcttcaacgcccagacttaccgggactgggtggggctgagcgaggacgacgtgatcctc
ggggtggcgccgctgttccacatcaccgggctgatcgggcacatcgcggtggccctgctg
gtcggcgcgccgctcgtgttgatgcaccgcttcgacgcggcgcgcaccgtggagacggtg
cgcgcggagcgggcgacgttcaccgtcgggtcgatcacggtgttcatcgcgttgatgaac
gtgcccgacgtggaccgggatgcgctggcttcgctgcggaagatctactcgggcggggcg
ccgatcccgccgagcacggtgaaggccttccaggcgatgttcggcacgtacatccacaac
tgctacggcctcacggagacgacatcaccgtcacacgcggtgccgttcggcgtggaagcg
ccggtggaccccgcttccggcgcgttgtcagtcggggtgccggtgtacgacacggtggtg
cgggtcgtcgacgaggacggccgggagctgcctgccggcgaggtgggcgagctggtgacg
tccggaccgcaggtggtggccggatactgggaaaagccggcggaggcggagaaggcgctt
cccgggggacgcctgtacacgggcgacgtcgggtacatggacgccgagggctggttctac
gtggtggaccggaagaaggaccagatcaacgcgggcgggtacaaggtgtggccgcgcgag
gtcgaagacgtcctgtacgaacacgaagccgtgcgggaagccgcggtggtcggcgtcccg
gacgagtaccggggcgagacggtgaaggcgttcgtcagcctgcgccccgggttttcggtc
acggcggaggaactgatttcgttctgccgccaacgcatggcggcttacaagtatccgcgc
caggtggaattcctggaggaactgccgaagaccgtgtcaggcaaactactgcgccgcgcg
ctgcgcggcggttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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