KEGG   Actinoplanes missouriensis: AMIS_3670
Entry
AMIS_3670         CDS       T01795                                 
Name
(GenBank) putative ATP-dependent DNA helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
ams  Actinoplanes missouriensis
Pathway
ams03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ams00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AMIS_3670
  09124 Replication and repair
   03420 Nucleotide excision repair
    AMIS_3670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ams03021]
    AMIS_3670
   03400 DNA repair and recombination proteins [BR:ams03400]
    AMIS_3670
Enzymes [BR:ams01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AMIS_3670
Transcription machinery [BR:ams03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     AMIS_3670
DNA repair and recombination proteins [BR:ams03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     AMIS_3670
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD
Other DBs
NCBI-ProteinID: BAL85587
UniProt: I0GXV0
Position
complement(385364..387025)
AA seq 553 aa
MSGGPLIVQSDKTLLLEVDHPDAQACRMAIAPFAELERSPEHVHTYRLTPLGLWNSRAAG
HDAESVVDALIKFSRYPVPHALLVDIAETMDRYGRLQLLNDPVHGLVLRGLDRIVLVEVA
KSKKLAGMLGARIDDETIAVHGSERGRLKQALLKLGWPAEDLAGYVDGEAHEIDLAQDGW
TLRSYQQEAVDGFWAGGSGVVVLPCGAGKTLVGAAAMATAKATTLILVTNTVAGRQWKRE
LIARTSLTEDEIGEYSGERKEIRPVTIATYQVLTSRRGGAFTHLDLFGARDWGLVIYDEV
HLLPAPIFRFTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTLTDAERMAYAVTEAEERYRVAASARTKLPVVKALVEKHPGEQVLVIGGFLD
QLHELGEYLDAPIVQGSTTNKERERLFDAFRDGSLRTLVLSKVGNFSIDLPEAAVAIQVS
GTFGSRQEEAQRLGRVLRPKGDGRQAHFYTVVSRDTIDTEYAAHRQRFLAEQGYAYTIVD
ADDVLGPPLPQID
NT seq 1662 nt   +upstreamnt  +downstreamnt
gtgagcggcggaccactgatcgtgcagtcggacaagaccctgctcctggaggtggatcac
ccggacgcacaggcgtgccggatggcaatcgcacccttcgccgagctggaacgctcgccg
gagcacgtgcacacgtaccgactgaccccgctcgggctgtggaactcgcgggccgccggc
catgacgcggagagcgtggtcgacgcgctcatcaagttctcgcgttacccggtgccgcac
gcgctgctcgtggacatcgccgagacaatggaccgctacggccgtctgcagctgctgaac
gacccggtacacggcctggtcctgcgcggcctcgacaggatcgtgctggtcgaggtggcg
aaatcgaagaagctggccggcatgctcggcgcccggatcgacgacgagacgatcgcggtg
cacggctcggagcgcggccggctcaagcaggcgctgctgaaactcggctggccggccgag
gacctggccggttacgtcgacggcgaggcgcacgagatcgacctcgcgcaggacggctgg
acgctgcggtcgtaccagcaggaggcggtcgacggcttctgggccggcggctccggcgtg
gtggtgctgccctgcggcgccggcaagacgctggtcggcgcggctgcgatggcgacggcg
aaagcgacgaccctgatcctggtgaccaacacggtcgccggccggcagtggaaacgcgag
ctgatcgcgcggacgtcgctgaccgaggacgagatcggggagtacagcggcgagcgcaag
gagatccgcccggtcaccatcgcgacgtaccaggtgctcacgtcgcgccgcggcggcgcc
ttcacccacctggacctgttcggcgcccgcgactggggcctggtcatctacgacgaggtg
cacctgctgcccgcgccgatcttccgcttcaccgcggacctgcaggcccgccgccggctc
ggcctcaccgccaccctggtacgcgaggacggtcgcgagggtgacgtcttctcgctgatc
ggcccgaaacgctacgacgccccgtggaaggacatcgaggcgcagggctggatcgccccg
gccgagtgcgtcgaggtccgggtcacgctgaccgacgcggaacggatggcgtacgcggtg
accgaggccgaggagcgttaccgggtggcggcctccgcccgtaccaaattgcctgtggtc
aaggccctggtcgagaagcacccgggcgagcaggtgctggtgatcggcggcttcctggac
cagttgcacgagctcggcgagtacctggacgccccgatcgtgcagggctccaccacgaac
aaggagcgggaacggctcttcgacgcgttccgtgacggctcactgcggacgctggtgctc
tccaaggtcggcaacttctcgatcgacctgcccgaggctgcggtggcgatccaggtctcc
ggcacgttcggctcccgccaggaggaggcgcagcgcctcggccgggtgctgcggcccaag
ggcgacggccggcaggcgcacttctacacggtcgtctcccgggacaccatcgacaccgag
tacgcggcgcaccggcagcgtttcctggccgagcagggttacgcgtacacgatcgtcgac
gccgacgacgtgctcggcccgccgctaccccagatcgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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