KEGG   Alkaliphilus metalliredigens: Amet_2789
Entry
Amet_2789         CDS       T00551                                 
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
amt  Alkaliphilus metalliredigens
Pathway
amt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:amt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Amet_2789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amt03021]
    Amet_2789
   03400 DNA repair and recombination proteins [BR:amt03400]
    Amet_2789
Enzymes [BR:amt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Amet_2789
Transcription machinery [BR:amt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Amet_2789
DNA repair and recombination proteins [BR:amt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Amet_2789
SSDB
Motif
Pfam: RNA_pol_Rpb6 Sh_2
Other DBs
NCBI-ProteinID: ABR48939
UniProt: A6TRX1
Position
complement(2806623..2806829)
AA seq 68 aa
MLKPSINELLTVVDSRYSLVVATAKRARQIIDGAKIKVDSDSNKPVSTAAKEIYEGKVTY
IKTDEDER
NT seq 207 nt   +upstreamnt  +downstreamnt
atgttaaaaccatcaattaatgaactgttaaccgttgtagatagtcgatattcacttgtt
gttgccaccgcaaaaagagcgcgacaaatcatagatggagccaagataaaggtggactct
gattcaaataagcctgtgtctactgcagcaaaggaaatttatgaaggtaaagtaacatat
ataaaaactgatgaagacgaaagataa

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