KEGG   Akkermansia muciniphila: Amuc_0686
Entry
Amuc_0686         CDS       T00736                                 
Name
(GenBank) ABC transporter related
  KO
K03701  excinuclease ABC subunit A
Organism
amu  Akkermansia muciniphila
Pathway
amu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:amu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Amuc_0686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amu03400]
    Amuc_0686
DNA repair and recombination proteins [BR:amu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Amuc_0686
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Amuc_0686
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind SMC_N AAA_21 AAA_16 nSTAND1 AAA_29 AAA_25 ATPase DnaJ_CXXCXGXG AAA_23 AAA_15 Viral_helicase1 zf_Rg RecA AAA_22 Peripla_BP_4 DUF463 MobB cobW Anti-TRAP
Other DBs
NCBI-ProteinID: ACD04523
UniProt: B2UPY8
Position
806102..808633
AA seq 843 aa
MSQFSNFQSRPDHIEIRGARVHNLKNIDLDIPLGKLVGITGVSGSGKSSLALGVLYAEGS
RRYLEALSAYTRRRIIQMAEAKIDSIEYVPAALALRQRPAVPGVRSTFGTATELLNSIRL
MFSRLGNHRCPNGHLLSPSVNVAAMRPLVCSVCGAVFDGLSAESFSFNGQGACHTCGGTG
IVQAVDETTLVPDESLSIDEGAVAPWNSLMWSLMTNVCRAMGVRTDVPFSELTEQEREIV
FHGPPEKKHILYKAKSSNQAGEMDFTYYNAVYTVENALAKVKDEKGMKRVEKFLKRNACP
NCGGSRLNKRALSSLLCGKNLAEITKMTLSDLTAWIKTISASMPEELKTMAESICGQFLH
VSKRLSGLGLDYITLDRAGTTLSTGERQRVQLARAVRNRTTGVLYVLDEPSIGLHPANVD
GLLGVIDDLIAHGNSVILVDHDVRVLKAADWLIEMGPKAGEHGGQIVAQGTIKAVAKKTS
SLIVGFLADKEKPVIRETATPEAMFAHGHIKLSTAPLHTVHALDLDIPKGRLIAVTGVSG
SGKTTLILESLIPAIEAAIAKAPMPDHVKSVEVAGIERINLIDATPIGVNGRSTVATYSG
ILDDLRRLYAAIPEAKSKGYKVSDFSYNTGSLRCFGCDGTGQITMDVQFLPDVDIICPDC
GGSRYGKEAEAIRYRSKKDKVNAPGISLPVLMGMTVEQALERLCDVKKVKEKLQILSDLG
LGYLTLGEATPALSGGEAQRLKLAAEMEKAQDDAIFVFDEPTIGLHPLDVRILIGVFQKL
VDAGATVIVIEHDLNMIANSDYVVDMGPGGGKAGGQIVATGLPKKIAETAESLTGKYLCE
IIS
NT seq 2532 nt   +upstreamnt  +downstreamnt
atgagccagttttctaattttcaaagtagaccggatcacattgaaatccgtggcgcccgt
gttcataatctgaaaaatattgatttagatatcccgttgggcaagctggtaggaattacg
ggggtgtcaggatcaggaaagtcctctttggctttgggcgtactttatgccgaaggttcc
cgccgctatttagaggcattgtccgcctatactcggcggcgtataatacagatggcagag
gcaaaaattgacagtatagaatatgtcccggctgcccttgctcttcgtcaacgtcccgct
gttcccggtgtccgcagtacatttggaacggctaccgaacttttgaactcaatccggctt
atgttttcccgcttgggaaatcaccgctgtcccaatggacatttgctttcgccatcggtc
aacgtcgcggcaatgcgtccccttgtctgctctgtatgcggagcggtatttgacggtctc
agcgcagaaagtttttcattcaatggccaaggagcgtgtcacacctgcggaggaactgga
attgttcaagcagtagacgaaacaactttagtgcctgacgagtccctttccattgacgaa
ggagcagttgcgccgtggaattctttgatgtggtcgctgatgactaacgtatgccgggcg
atgggcgttcgaaccgatgtacctttttcggagttgacagaacaggaacgggagatcgtc
tttcatggtccgccagaaaagaaacatatcctttataaagcaaagagcagcaatcaagcg
ggagaaatggattttacctattataacgctgtttataccgtggaaaatgcccttgctaaa
gttaaagacgaaaagggaatgaagcgggtagaaaaatttttgaagcggaacgcctgcccg
aattgcggaggctcccggctcaataagcgggcgttatcaagtctgctatgcggaaaaaac
cttgcggaaatcaccaaaatgacattaagcgatttaaccgcttggataaagacgatttct
gcttccatgccggaagaactaaaaacaatggcggaaagtatctgcggtcaatttctgcat
gtatcaaaacgtctttctggcttaggtctggattatattacccttgaccgggccggaaca
acgctttccaccggagagcgtcaacgcgtgcagcttgcaagggctgtacgaaaccgtacc
acaggtgttctctatgtgttggatgaaccgtctattggcttacacccagcaaatgtagat
gggctgttgggcgttatagatgatcttattgctcatggtaattctgtgatactggtagac
catgatgtgcgagttttaaaggctgctgattggttaattgaaatgggcccaaaagctgga
gagcatggcggacagatagttgcacagggaacgattaaagcagtagcaaaaaaaacgagt
tcactcatcgttggatttttggcagacaaggaaaaaccggttatccgagaaacggcaacg
ccggaggccatgtttgcacatgggcatatcaaactgtctactgctcctttgcatacagtc
catgcccttgatttagacatccccaaaggtcggctgattgctgtaacaggagtttccggt
tccggcaaaacaacactgattttggaaagtcttattcccgccatagaagctgccatagcg
aaagcgccgatgcctgaccatgtgaaaagcgtggaggtagccggtattgaacgtataaat
cttattgatgcaacacctattggcgtgaatggccgttctaccgttgcaacatacagcggg
atattagatgatttgcgccggctttatgcagctatcccggaagcaaaatcaaaagggtat
aaagtaagtgacttttcctataatactgggtcactccgttgctttggttgtgacggaaca
ggtcaaattacaatggatgtgcaatttctcccggacgtggatatcatctgcccggactgc
ggcggctcccgctatggaaaagaagcggaggcaattcgttatcgctctaaaaaagacaag
gtgaacgcacccggtatttctctgcctgtactgatggggatgaccgtggagcaggcgtta
gaacgcttatgtgacgtgaaaaaggttaaagaaaagctccaaattctttctgatttaggt
ttgggttatttaactttaggcgaagcaactcctgccctgtccggcggtgaggcacagcgg
ctaaagctggcggctgaaatggaaaaggcacaggacgacgccatatttgtatttgacgag
ccaacgattggacttcatccgctggatgtacggatactaattggcgtatttcagaaactt
gttgatgccggtgcaacagttatcgtcattgagcatgatttaaacatgattgccaattcc
gattatgtggtcgatatggggccgggaggcggcaaagcaggaggacaaattgtagcaact
ggtttgcctaaaaaaatcgctgaaacggctgaaagccttacaggaaaatatctatgtgaa
ataatttcatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (52)   

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