KEGG   Acidiphilium multivorum: ACMV_00370
Entry
ACMV_00370        CDS       T01446                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
amv  Acidiphilium multivorum
Pathway
amv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACMV_00370 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amv03019]
    ACMV_00370 (rnr)
   03016 Transfer RNA biogenesis [BR:amv03016]
    ACMV_00370 (rnr)
Enzymes [BR:amv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     ACMV_00370 (rnr)
Messenger RNA biogenesis [BR:amv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACMV_00370 (rnr)
Transfer RNA biogenesis [BR:amv03016]
 Prokaryotic type
  tRNA degradation factors
   ACMV_00370 (rnr)
SSDB
Motif
Pfam: RNB S1 CSD2
Other DBs
NCBI-ProteinID: BAJ79384
UniProt: F0J102
Position
34256..36493
AA seq 745 aa
MTRKPVRRSAELPTEAVLREFIAEAGTRLRKGDIARAFGLGPDQKPALRAMLRNLERDGM
LVRAGGRQVRAAEALPERCVVEITGTDRDGDPLARPVGWDRQGKPPIIFMLPEKRGHAAL
APGARVLARLRRIDDDRYEGRTVRRLDEEPASIIGVFRAEGEGGWIEPVDRKSRAEWKVP
PGETAGAESGDVVRAMPLPAFGYGPKPARIAEHLGRMGDARSISLIAIAALGIPADFPET
AIDEAKRARGVRPGRRTDLREVPLVTIDGADARDFDDAVFAEPAGPGHRIVVAIADVAHY
VRPGSALDREALKRGNSVYFPDRVVPMLPEALSNGWCSLRPGEDRGCLFVEMIVDAEGRK
LSHKFGRGLMRSFARLTYEEVQGAFESGWEADLPDGTIGHLYAAYRTLLAARQARGTLDL
DLPERKITLDEAGRVTDVAPRPRLDSHRLIEEFMILANVAAAEELERLRQPCMYRVHAPP
SPEKLDSLRNLLATLEISLKPGDQLHPRDLDHVLRLVAGSDAAPLVNEAVLRSQSQAEYA
PENIGHFGLALNSYAHFTSPIRRYADLLVHRALIAGLKLGTDGLRPEHADGFETIAAAIT
STERRATDAERQSADRYLAAYLADRIGEDFSARVSGVTRFGLFVTLDATGASGFVPMALL
PDDFWHFDEADGTLSGTRSRVVFRLADPVLVRLREAKPLTGGLLFSLIEGGSAPGEGGGQ
HRRLPARKGGRKPGRAPARHKRSRR
NT seq 2238 nt   +upstreamnt  +downstreamnt
atgacccggaagcccgtccgccgatccgccgaactgccgaccgaggctgtgttgcgcgag
ttcatcgccgaagccggaacccggctgcgcaagggcgacattgcccgcgccttcggcctc
ggccccgaccagaaaccggcgctgcgggcgatgctgcggaatctcgaacgcgatggcatg
ctggtccgcgccggcgggcggcaggtgcgcgcggccgaggcgctgccggaacgctgcgtc
gtcgagatcaccggcaccgatcgtgacggcgacccgcttgcccggccggtcggctgggac
cggcagggcaagccgccgatcatcttcatgctgcccgaaaagcgcggccacgctgcgctc
gcgcccggcgcgcgggtgctggcccggctgcgacggatcgacgacgaccgttacgaaggc
cgcacggtccggcggctcgacgaggagccggccagcatcatcggcgtgttccgcgccgag
ggagagggcggctggatcgagccggtggaccgcaagagccgcgccgaatggaaggtgccg
ccgggcgaaaccgccggtgccgaaagcggcgacgtggtgcgcgccatgcccttgccggcc
ttcggctacgggccgaagccggcgcggatcgccgagcatctcggccggatgggcgatgcg
cgctcgatcagcctgatcgccatcgcggcactggggattccggccgacttcccggagacc
gcgatcgacgaggcgaagcgcgcccgcggcgtccgccccggccggcggaccgatctgcgc
gaagtgccgctggtgacgatcgacggcgccgatgcgcgcgacttcgatgacgccgtcttc
gccgaacccgctgggccggggcatcgcatcgtcgtcgccatcgccgatgtcgcgcattac
gtgcgccccggctcggcgctcgaccgcgaggcgctgaagcgcggcaactcggtctatttc
cccgaccgcgtggtgccgatgctgcccgaggcgctctccaacggctggtgcagcctgcgg
ccgggcgaggacaggggatgcctgttcgtcgagatgatcgtcgacgccgagggccgcaag
ctgagccacaaattcggccgcggcctgatgcgcagcttcgcccgcctcacctacgaggag
gtgcagggcgccttcgagtccggctgggaagccgatctgccggacgggacgatcggccat
ctctacgccgcctatcgcacgctgctggcggcgcggcaggcccgcggcacgctcgatctc
gacctgccggagcgcaagatcacgctcgacgaggctggccgggtgacggacgtggcgccg
cgcccgcggctcgacagccaccggctgatcgaggagttcatgatcctcgccaatgtcgcg
gcggcggaggagctggaacggctgcgccagccgtgcatgtatcgcgtgcacgccccgccc
tcgccggaaaagctcgattcgctgcgcaatctgctggcgacgctcgagatttcgctcaag
cccggcgaccagctccacccgcgcgaccttgatcatgtgctgcgccttgtcgccggtagc
gatgcggcgccgctggtgaacgaggcggtgctgcgcagccagagccaggcggaatacgcg
ccggagaatatcggccatttcggcctggcgctgaacagctacgcgcatttcacctcgccg
atccgccgctatgccgatcttctggtccatcgcgcgctcatcgccgggctgaagctcggc
accgacgggctgcgtcccgaacacgccgacggattcgaaaccatcgcggcggcgatcacc
tcgaccgagcgccgcgccaccgatgccgagcggcaatcggccgaccgctatcttgccgcc
tatctggccgaccggatcggcgaggatttcagcgcgcgggtcagcggggtgacgcggttc
ggcctgttcgtcacgctcgatgcgaccggcgcgtccggtttcgtgccgatggcgctgctg
cccgacgatttctggcatttcgacgaggccgatggcacgctgtccggcacccgctcgcgc
gtggtgttccgcctggccgatccggtgctggtgcggctgcgcgaggcgaagccgttgacc
ggcgggctgctgttctccctgatcgagggcggcagcgcgccgggcgagggcggtggacaa
catcgccggttgccggcccgcaagggcggcaggaagccgggccgcgcgcccgccaggcac
aagcgcagccgccgatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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