KEGG   Amycolatopsis sp. BJA-103: BKN51_23050
Entry
BKN51_23050       CDS       T05296                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
amyb  Amycolatopsis sp. BJA-103
Pathway
amyb02020  Two-component system
amyb02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:amyb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BKN51_23050
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BKN51_23050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amyb03021]
    BKN51_23050
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:amyb02035]
    BKN51_23050
Transcription machinery [BR:amyb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BKN51_23050
Bacterial motility proteins [BR:amyb02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    BKN51_23050
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 UPF0122 KORA
Other DBs
NCBI-ProteinID: AUI60776
UniProt: A0A2N8N3U8
Position
complement(5402746..5403687)
AA seq 313 aa
MTRRPEPAAHAHPHEHEHGDHPESHAENGGPMTADPHVTEAAGKHRPGGDGPAVASESRS
GYEVDAGIQALWREFTEAPDQIVRDRLVLHYAPLVKYVAGRVGTGLPTHVDVGDLIQSGI
FGLVDAIEKFEPARGLRFETYAMQRIRGAILDDLRSQDWVPRAVRSKAREAERALERLGA
RLNRTPTDAELAAELEISVDDLREFYGQMQLTSVIALEDLVAAGKDSGSLVDTLPDDGAV
DPVAVLVDQDNRRQLAQAIAQLTERDRIVVGLYYFESLTLAEIGKVLGVTESRVSQLHTR
AVMRLRAKLVEQA
NT seq 942 nt   +upstreamnt  +downstreamnt
gtgacccggcggcccgaaccggcggcgcacgcgcatccgcacgagcacgagcacggagac
caccctgagtcgcatgctgagaacggcggtccgatgaccgccgacccacatgtcaccgaa
gccgccgggaaacaccgtcccggcggggacggtcctgccgtcgcgtccgaatcgcggtcg
ggctacgaggtggacgccgggatccaggcgctgtggcgggagttcaccgaggcgccggac
cagatcgtgcgcgacaggctcgtgctgcactacgcaccgctcgtcaaatacgtcgcgggc
cgcgtcggcaccggcctgccgacccacgtcgacgtcggcgacctgatccagtccgggatc
ttcggcctggtcgacgcgatcgagaagttcgaacccgccaggggcctgcggttcgagacc
tacgccatgcagcgcatccggggcgcgatcctcgacgacctccgttcccaggactgggtc
ccccgggcggtgcgcagcaaggcccgcgaggccgaacgcgcgctggaacgcctcggcgcc
cggctgaaccgcacgccgaccgacgccgaactggcggccgagctcgaaatcagcgtcgac
gacctgcgcgagttctacggccagatgcagctgaccagcgtcatcgcgctcgaagacctg
gtcgccgccggcaaggacagcggctcgctggtcgacaccctgcccgacgacggcgccgtc
gacccggtggccgtcctggtcgaccaggacaaccgccgccagctggcacaggcgatcgcc
cagctcaccgaacgcgaccggatcgtggtcggcctctactacttcgagagcctgaccctc
gccgagatcggcaaggtcctcggcgtcaccgagtcccgggtcagccagctgcacacccgc
gccgtcatgcggctgcgcgcgaaactggtcgagcaggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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