KEGG   Amycolatopsis sp. AA4: CU254_18910
Entry
CU254_18910       CDS       T05278                                 
Symbol
gabD2
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
amyc  Amycolatopsis sp. AA4
Pathway
amyc00250  Alanine, aspartate and glutamate metabolism
amyc00310  Lysine degradation
amyc00350  Tyrosine metabolism
amyc00650  Butanoate metabolism
amyc00760  Nicotinate and nicotinamide metabolism
amyc01100  Metabolic pathways
amyc01120  Microbial metabolism in diverse environments
Module
amyc_M00027  GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:amyc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    CU254_18910 (gabD2)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    CU254_18910 (gabD2)
   00310 Lysine degradation
    CU254_18910 (gabD2)
   00350 Tyrosine metabolism
    CU254_18910 (gabD2)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    CU254_18910 (gabD2)
Enzymes [BR:amyc01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     CU254_18910 (gabD2)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     CU254_18910 (gabD2)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     CU254_18910 (gabD2)
SSDB
Motif
Pfam: Aldedh OmdA
Other DBs
NCBI-ProteinID: ATY12306
UniProt: A0A2K8LV84
Position
complement(4053485..4054969)
AA seq 494 aa
MTITNARRLDTALPASLTQARLERLAALVAAAGAQRVVTTSPYTGAPLADLPVSTPDDVE
EAFARARAAQAGWAATPVADRARILLRFHDLVLQRQEQALDLMQADSGKTRRDAFLEVGD
IAVTARYYARSARRLLSPKRRKGAIPVLTHTTELHHPKGVVTVISPWNYPLSMAAGDAIP
ALLAGNAVVQKPDTQTALTALWAMELMREAGLPADVWQMVIGRGSSIGGALMAGADYLMF
TGSTASGRQIARDAGERLIGASLELGGKNAMVVLADADIEKAAAGAVAACFPSAGQLCVS
VERLYVADEIHDAFVAAFVERTRAMRLGAAYDFSMDMGSLTTPSQLETVSAHVGDAVSKG
ATVLAGGRARPDLGPLFYEPTMVAMANATPYGLNASVWGRNGAEARKVARRLHAGTVNEA
FAAAWGSIDAPMGGMGDSGLGRRHGADGLLKYTEAQTVAHQRLQGFNPPRGIEHEQWARL
LTRAFKMLRALGVR
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgaccatcacgaacgcgcgccgcctcgacaccgctcttccggcttcgctgacgcaggcc
cggctcgagcgcctggccgccctggtcgccgctgccggagcccagcgggtcgtcacgacc
tcgccctacaccggcgcaccgctcgcggacctgcccgtctccacccccgacgacgtcgag
gaggccttcgcccgggcacgcgctgcccaggccggctgggcggcgaccccggtggccgac
cgcgcgcgcatcctgctgcgcttccacgacctcgtccttcagcggcaagagcaggctcta
gacctgatgcaggccgacagcggcaagacccgtcgcgacgccttcctcgaggtcggcgac
atcgccgtcaccgcccgctactacgcgcgcagcgcacggcggctgctctcgccgaagcgt
cgcaagggcgcgatcccggtgctgacccacaccaccgaactgcaccaccccaagggcgtc
gtcaccgtcatctcgccgtggaactacccgctcagcatggccgccggcgacgccattccg
gccctgctggccggcaacgccgtggtgcagaagcccgacacccagaccgcactgaccgcg
ctgtgggcgatggagctgatgcgcgaggccggattgcccgccgacgtgtggcagatggtg
atcggccgcggcagctccatcggaggcgcgctcatggccggcgcggactacctgatgttc
accggctccaccgccagcgggcgacagatcgcgcgcgacgcgggcgagcggctcatcggc
gcgtcgctggagctgggcggcaagaacgccatggtggtgctcgccgacgccgacatcgag
aaggccgccgccggtgcggtcgccgcctgtttcccctcggccgggcagctgtgcgtgtcc
gtcgagcggctttacgtcgccgacgagatccacgacgcgttcgtggccgcgttcgtcgag
cgcacccgggccatgcgcctgggtgctgcctacgacttctcgatggacatgggctcgctg
accacgccctcgcaactcgagacggtcagcgcacacgtcggcgacgcggtgtcgaaaggc
gcgacggtgctggccggcggccgcgcccgtcccgacctcgggccgctgttctacgagccg
acgatggtggcgatggccaacgccactccgtacggactcaacgcgagcgtctggggccgc
aacggcgccgaggcccgcaaggtggcgcgacggctgcacgccggcaccgtcaacgaggcg
ttcgccgccgcctggggcagcatcgacgcccccatgggcggcatgggcgactcgggcctc
ggccgccggcacggcgccgacggactgctcaagtacaccgaagcccagaccgtcgcccac
cagcggctccagggcttcaacccgccccgcggaatcgagcacgagcagtgggcgcggctc
ctgacccgggcgttcaagatgctgcgcgcactgggcgtccgatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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