KEGG   Amycolatopsis sp. YIM 10: YIM_39195
Entry
YIM_39195         CDS       T06270                                 
Symbol
cefD
Name
(GenBank) Isopenicillin N epimerase
  KO
K04127  isopenicillin-N epimerase [EC:5.1.1.17]
Organism
amyy  Amycolatopsis sp. YIM 10
Pathway
amyy00311  Penicillin and cephalosporin biosynthesis
amyy01100  Metabolic pathways
amyy01110  Biosynthesis of secondary metabolites
Module
amyy_M00673  Cephamycin C biosynthesis, aminoadipate + cycteine + valine => cephamycin C
Brite
KEGG Orthology (KO) [BR:amyy00001]
 09100 Metabolism
  09110 Biosynthesis of other secondary metabolites
   00311 Penicillin and cephalosporin biosynthesis
    YIM_39195 (cefD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01008 Polyketide biosynthesis proteins [BR:amyy01008]
    YIM_39195 (cefD)
Enzymes [BR:amyy01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.17  isopenicillin-N epimerase
     YIM_39195 (cefD)
Polyketide biosynthesis proteins [BR:amyy01008]
 Nonribosomal peptide tailoring proteins
  Others
   YIM_39195 (cefD)
SSDB
Motif
Pfam: Aminotran_5 Cys_Met_Meta_PP Glyco_hydro_97
Other DBs
NCBI-ProteinID: QFU92991
UniProt: A0A5P9PXI6
Position
8262530..8263717
AA seq 395 aa
MVAKAWASARDQVLRDPAVINLNTGSCGRLPRPVFDRVTALRTRLAAGPMDFLSRQLPSL
LWTARERLAEYVGTRPHRLAFTTNVTGAVNLVASSVRLARGAEILLTDQEYAPMRWCWER
AARRQGAVVRTFRLPAQPTDPEEVVEAAAAAMGPRTRLFFFSHVVSATGLVMPTARLCEE
AHRRGILTVVDGAQAPGFTGLDLDNLPCDYYAGSGHKWLLAPTGVGFLHFGDDQADVLQP
AQVSWGYHGPDGHAPDERTEFGSTPRLRNLECEGTRDLCPWLAVPDAIDFQAGFGHERVR
ARARELAAFTRERLSGRHGLEPVTPEHPELSGAMTAFALPPGTGPGLSRELWRRFRIEVP
VTGPPERPLLRVSTHFHNTETEVERLAEALKELSR
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggtcgcgaaagcctgggcgagcgcccgtgaccaggtgcttcgcgacccggccgtgatc
aatctcaacaccggttcctgcggcaggctgccgcgtccggtgttcgaccgggtcaccgca
ctgcgtacgcggttggccgccgggccgatggacttcctctcgcggcagctgccttcgctg
ctctggaccgcgcgcgagcgcctggccgaatacgtgggcacgcgcccgcaccggctggct
ttcaccaccaacgtgaccggcgcggtcaacctggtggcctcgtcggtgcgcctggcgcgc
ggcgcggaaatcctgctcaccgaccaggaatacgcccccatgcggtggtgctgggagcgg
gcggcgcggcggcagggcgcagtggtccggacctttcggctgccggctcagccgaccgat
cccgaggaggtcgtcgaggccgccgcggccgcgatgggcccccgcacccggctgttcttc
ttcagccacgtggtatccgcgaccggcctggtaatgcccaccgcgcggctgtgcgaagaa
gcacaccgccgcggcatcctgaccgtggtcgacggagcgcaggcgccgggattcactggt
ctggacctcgacaacctgccgtgcgactactacgcgggcagcgggcacaaatggctgctg
gccccgaccggcgtcggtttccttcacttcggcgacgaccaggccgacgtgctccagccc
gcgcaggtgagctggggctaccacgggcccgacggtcacgcacccgacgaacgcacggaa
ttcggcagcactccccggctgcgcaacctcgaatgcgagggcacgcgagacctgtgccca
tggctggccgtgccggacgcgatcgacttccaggccgggttcgggcacgagcgcgtccgg
gcgcgcgcacgcgagttggcggcgttcacccgtgaacgcctcagcggccggcacggactg
gagccggtgacgccggagcacccggagctgtccggcgcgatgaccgcgttcgcgctgccg
ccgggcaccggccccgggttgagccgcgaactgtggcgccggttccggatcgaggtaccg
gtgaccgggccgcccgaacgcccgctgctgcgggtgtccacgcatttccacaacaccgaa
accgaagtcgagcgcctggcggaggcgttgaaggagctgagcagatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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