KEGG   Amycolatopsis mediterranei RB: B737_3975
Entry
B737_3975         CDS       T02804                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
amz  Amycolatopsis mediterranei RB
Pathway
amz00300  Lysine biosynthesis
amz00470  D-Amino acid metabolism
amz01100  Metabolic pathways
amz01110  Biosynthesis of secondary metabolites
amz01120  Microbial metabolism in diverse environments
amz01230  Biosynthesis of amino acids
Module
amz_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:amz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    B737_3975 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    B737_3975 (lysA)
Enzymes [BR:amz01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     B737_3975 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AGT84639
Position
4405331..4406626
AA seq 431 aa
MSVEFEISGVGIAELAERYGTPLFVYDGDELGGRLLGLREQLHPRLEIFYSLKANPNISV
CALLHAHGARAEVSSMAELITARRAGVAGEDIIFLGPGKSTSELAACLDEGVYTVVCESF
GELKILDELARERGIEARVALRVNPSFAVKGSGLTMGGKPRQFGIDEEQLLAATDLVDRH
PNLRLMGVQVYMGTRILDEEPIVENTRRIFELAERVSRRLGFPLDMVDVGGGLGVAYFDG
ERDLDRDLLASLLNPVIDEFAQRHPATRLVMELGRYLAATSGTYVVRVRYTKTSLGQNFA
VADGGTNHHMAAVGIGSYVKRDFPIRLLNRIDEPATETWQVTGPLCTPNDVLAKKAALPP
VRPGDLVGVTRSGAYGPTASPVLFLSHGYPAEVIVHCGRHYLVSERDEPADLLRRQHLHE
FAPPVAVGAER
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgagtgtcgaattcgagatctccggcgtcggcatcgccgaactcgcggagcgttacggc
accccgctcttcgtctacgacggtgacgaactgggcggccggctgctgggtctccgtgag
cagctgcacccgcggctggagatcttctattcgctcaaggccaatccgaacatctcggtg
tgcgcgctgctgcacgcccacggtgcccgggccgaagtctcgtcgatggccgaactgatc
accgcgcgccgggccggcgtcgccggcgaggacatcatcttcctcggccccggcaagagc
acctcggaactggccgcgtgcctggacgaaggcgtctacaccgtcgtctgcgaatcgttc
ggcgagctgaagatcctcgacgagctcgcgcgcgaacgcgggatcgaagcgcgggtcgcg
ctgcgcgtgaaccccagcttcgcggtcaagggctcgggcctcaccatgggcggcaagcca
cgccagttcggcatcgacgaagaacagctgctcgccgccaccgacctcgtcgaccggcac
ccgaacctgcggctgatgggcgtgcaggtctacatgggcacccggatcctcgacgaggag
ccgatcgtcgaaaacacgcggcgcatcttcgagctcgccgaacgcgtctcgcgccggttg
ggcttcccgctggacatggtcgacgtcggcggcggcctcggggtcgcgtacttcgacggc
gaacgggacctcgaccgcgatctgctcgcttcgctgctcaacccggtgatcgacgagttc
gcgcagcggcacccggcgacccggctggtcatggagctcggccggtacctggccgccact
tccgggacctacgtcgtccgcgtccgctacacgaagacctcgctggggcagaacttcgcc
gtcgccgacggtggtacgaaccaccacatggccgccgtcggcatcgggtcctacgtcaag
cgcgacttcccgatccggctgctcaaccgcatcgacgaacccgccaccgaaacctggcag
gtgaccggtccgctgtgcacgcccaacgacgtgctcgcgaagaaggccgcgctgccgccg
gtccgcccgggcgacctggtcggcgtcacgcggtccggtgcctacggcccgacggcgtca
ccggtgctgttcctcagccacggctacccggccgaagtcatcgtccactgtggacggcac
tacctcgtcagcgagcgggacgagcccgcggacctgctgcgccgccagcacctgcacgag
ttcgcgccgccggtcgccgtgggcgcggagcgctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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