KEGG   Ancylobacter sp. TS-1: GBB76_11320
Entry
GBB76_11320       CDS       T06239                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
anc  Ancylobacter sp. TS-1
Pathway
anc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:anc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GBB76_11320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:anc03019]
    GBB76_11320
   03009 Ribosome biogenesis [BR:anc03009]
    GBB76_11320
Enzymes [BR:anc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     GBB76_11320
Messenger RNA biogenesis [BR:anc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     GBB76_11320
Ribosome biogenesis [BR:anc03009]
 Prokaryotic type
  rRNA helicases
   GBB76_11320
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_22 DUF1702
Other DBs
NCBI-ProteinID: QFR33660
UniProt: A0A5P8MYR0
Position
2407525..2409690
AA seq 721 aa
MTTNPALGRALAERDYNDPTPVQLAVLAPETAGRDLLVSAQTGSGKTVAYGLAMAETLLG
TDERFGPAAAPQALVVAPTRELALQVQREFAWLYTATDARIVACVGGMDPRQEQRLLNQG
AHIVVGTPGRLRDHLERGRLDISAVRVVVLDEADEMLDLGFREDLEFILNATPAERRSLL
FSATLPRGISALAKRYQRDALRIDITGAEGGHADIEYRALRIAPKQMEHVAINVLRFYDA
PSAIVFCNTREAVRHLHAMLQERQFSAVALSGELSQNERNLALQSLRDGRARVCVATDVA
ARGIDLPSLGLVIHAELPNDAESLQHRSGRTGRAGRKGISVLLVPPARRRRAQDLLAGLG
VAATWSGPPTADEIRALDHERMLVDPLLTEAPGEDDAAAARTLLATHSAEHLAAALARMY
RASLPAPEEVEDPGEPRSARERPVRGAFDGPVAAGESAWFRLTIGRRQNADPKWLLPLIC
RRGNVTRRDIGAIRIFDEETAFEVGLAAVERFSKAAGRPDSSGALIEPLEGPPPAGGPRS
GGSRPGGARSGADRPGRDSPRADAPGGTRSEGWTPLPRERPAPYKAPYKPARDDRPETTR
PETTRPEPTRPETRQPEAARPAPDRPARPAPRYERTRDDTPRRPEGARAERRDAPAGPPA
GEFKGKPKGAPKGAFKGAHKAGSKGAPAGAPTGAAKGKPKGLSKGKPKGKPNGKPPRRGH
D
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgaccacgaatccggcactcgggcgcgcccttgccgagcgcgactacaacgacccgacc
ccggtgcagctggccgtgctggcgccggagacggccgggcgcgacctgctggtgtcggcg
cagaccggctccggcaagaccgtggcttatggcctcgccatggcggaaaccctgctcggc
accgatgagcgcttcgggccggccgccgcgccgcaggccctcgtggtcgcccctacccgc
gagctcgccttgcaggtgcagcgcgaattcgcgtggctctacacggcgaccgacgcccgc
atcgtcgcctgcgtcggcggcatggacccgcgccaggagcagcgccttctcaatcagggc
gcccatatcgtcgtcggcacgcccgggcgtctgcgcgaccatctggagcgcggccggctc
gacatctccgcggtgcgggtggtggtgctggacgaagccgacgagatgctggacctcggc
ttccgcgaggatctcgaattcatcctcaacgccacgcccgccgagcggcgcagcctgcta
ttctcggccaccctgccgcgcggcatcagcgcgctcgccaagcgctaccagcgggacgcg
ctgcgcatcgacatcaccggtgcggaaggcgggcacgccgacatcgaatatcgcgccctg
cgcatcgcgccgaagcagatggagcacgtcgcgatcaacgtgctccgcttctacgacgcg
ccgagcgccatcgtgttctgcaacacgcgcgaggcggtgcgccacctgcacgccatgctg
caggagcgccagttctccgccgtcgccctgtcgggcgagctcagccagaacgagcgcaac
ctcgcgctccagtcgctgcgcgacggccgcgcgcgggtctgcgtcgccaccgacgtcgcc
gcacgcggcatcgacctgccgagcctcggcctcgtcatccatgccgagctgccgaacgat
gccgaaagcctccagcaccgcagcggccgcaccgggcgcgccggccgcaagggcatcagc
gtgctgctggtcccgcccgcccgccgccgccgggcgcaggacctgctggccggcctcggc
gtcgccgcgacctggtccggcccgcccaccgccgacgagatccgcgcgctcgaccatgag
cgcatgctggtcgacccgctgctgaccgaggcgccgggcgaggacgatgccgccgccgcc
cgcacgctgctcgccacgcattcggccgagcacctcgccgccgcgctggcgcggatgtac
cgggccagcctgccggccccggaagaggtggaagaccccggcgagccgcgcagcgcccgc
gagcgtcccgtccggggcgcgttcgacggcccggtggccgccggcgagagcgcgtggttc
cgcctcaccatcggccgccgccagaatgccgatccgaaatggctgctgccgctgatctgc
cggcgcgggaatgtgacgcgccgggacatcggcgccatccgcatcttcgacgaggaaacc
gccttcgaggtcggcctcgccgccgtcgagcgcttcagcaaggcggcgggccggccggac
agttccggcgcgctcatcgagccgctggaaggcccgcccccggcgggcgggccccggtcg
ggcggaagccggccgggcggcgcccggtccggtgccgacaggcccggcagggacagcccg
cgcgcggacgcgcccggcgggacgcgcagcgagggctggaccccgctgccccgcgagcgg
ccggcgccctacaaggctccctacaagccggcgcgtgacgacaggcccgaaaccacgcga
cccgagaccacacgacccgaaccgacgcgccccgagacgcggcagcccgaggccgcgcgg
cccgcccccgaccgcccggcgcgaccggctccccgctacgagcggacacgggacgacacg
ccgcgccgccccgaaggcgcgcgcgccgagcgccgcgatgcccccgccggcccgcccgcc
ggagagttcaagggcaagcccaagggggcgccaaagggcgcattcaagggcgcgcacaag
gccgggtccaagggtgcgcctgcgggagcccccaccggcgcagccaagggaaagcccaag
ggactctccaagggcaagccgaagggcaagcccaacggaaagccgccgcgacgcggccac
gactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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