KEGG   Anabaena sp. YBS01: EH233_10940
Entry
EH233_10940       CDS       T06262                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
ann  Anabaena sp. YBS01
Pathway
ann03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ann00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EH233_10940 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ann03021]
    EH233_10940 (rpoB)
   03400 DNA repair and recombination proteins [BR:ann03400]
    EH233_10940 (rpoB)
Enzymes [BR:ann01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EH233_10940 (rpoB)
Transcription machinery [BR:ann03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     EH233_10940 (rpoB)
DNA repair and recombination proteins [BR:ann03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      EH233_10940 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: QFZ12483
UniProt: A0A5Q0GEN0
Position
2554117..2557470
AA seq 1117 aa
MISENYIEPAFLLPDLIEIQRSSFRWFLEEGLIEELNSFSPITDYTGKLELHFLGHNYKL
KEPKYSVEEAKRRDSTYAVQMYVPTRLLNKETGDIKEQEVFIGDLPLMTDRGTFIINGAE
RVIVNQIVRSPGVYYKSEIDKNGRRTYSASLIPNRGAWLKFETDRNDLVWVRIDKTRKLS
AQVLLKALGLSDNEIFDALRHPEYFQKTIEKEGQFSEEEALMELYRKLRPGEPPTVLGGQ
QLLDSRFFDPKRYDLGRVGRYKLNKKLRLSVPDTVRVLTSGDILAAVDYLINLEYDIGSI
DDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSDAEVLTPASLVNPKPLVAAI
KEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFAVRDIHPSHYGRICPIE
TPEGPNAGLIGSLATHARVNQYGFLETPFRPVENGRVRFDQPAVYMTADEEDDLRVAPGD
IPVDENGHIIGPQVPVRYRQEFSTTTPEQVDYVAVSPVQIVSVATSMIPFLEHDDANRAL
MGSNMQRQAVPLLKPERPLVGTGLEAQGARDSGMVIVSRTDGDVVYVDATEIRVRVSGQL
PAASGKSTDNGQLTSQKGQEIRYTVSKYQRSNQDTCLNQKPLVRIGERVVAGQVLADGSS
TEGGELALGQNIVVAYMPWEGYNYEDAILISERLVQDDIYTSIHIEKYEIEARQTKLGPE
EITREIPNVGEDALRQLDEQGIIRIGAWVEAGDILVGKVTPKGESDQPPEEKLLRAIFGE
KARDVRDNSLRVPNGEKGRVVDVRLFTREQGDELPPGANMVVRVYVAQKRKIQVGDKMAG
RHGNKGIISRILPIEDMPYLPDGSPVDIVLNPLGVPSRMNVGQVFECLLGWAGHTLGVRF
KITPFDEMYGEESSRRIVHGKLQEARDETGKDWVYNPDDPGKIMVFDGRTGEPFDRPVTI
GVAYMLKLVHLVDDKIHARSTGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAFGAAYTL
QELLTVKSDDMQGRNEALNAIVKGKAIPRPGTPESFKVLMRELQSLGLDIAVHKVETQAD
GSSLDVEVDLMADQLARRTPPRPTYESLSRESLDDDE
NT seq 3354 nt   +upstreamnt  +downstreamnt
atgattagcgaaaattatattgaacccgcctttctgttgcccgacttgattgaaatccag
cgttcaagctttcgctggtttttagaagaagggctgatcgaagaacttaactcctttagt
cctattacagactatacaggcaaattagaactgcattttttaggacataattacaaactt
aaggagccaaagtacagcgttgaagaagcgaaacgccgcgacagtacttacgctgtacag
atgtatgtccctacccgcctattaaataaagaaaccggggatattaaagagcaggaagta
tttatcggggatctacctttgatgaccgatcgcggcacgtttattattaacggagccgaa
agggtaattgtcaatcaaattgtgcgatcgcctggagtttactacaaatcagaaatcgac
aaaaacggtcgccggacatattcagccagcctcatccccaaccggggcgcatggctaaaa
tttgaaacagaccggaacgatttggtatgggtacgcatcgacaaaacccgcaaactctca
gcccaagtactattaaaagcgctcggcttatcagataacgaaatttttgatgccctgcgc
cacccagagtacttccaaaaaaccatcgagaaagaagggcagttttccgaagaagaagct
ctgatggagttatatcgtaaactgcgaccaggcgaaccaccaaccgtactaggtgggcaa
caattgttagactcccgcttcttcgaccccaaacgctatgacttgggtcgagtcggtaga
tacaaactcaacaaaaaactacgcctatcagtccccgataccgtccgcgtcctcacctct
ggcgatattttggctgcggtcgattacctgatcaacctggaatatgacatcggtagtatt
gatgacatcgaccacttaggcaaccgtcgggtaagaagcgttggtgaattgctacaaaac
caagtcagagtaggcttaaaccgcctagaaagaatcattcgggaacggatgaccgtatct
gatgcggaagtattaacaccagcatccttggttaaccccaaaccattggtagccgccatc
aaagaattctttggctctagccaattgagtcagttcatggatcaaaccaatcctttagcc
gaactgacccacaaacgccgtctgtcagcccttggccctggtggtttaaccagagaacgg
gcgggttttgctgtgcgagatattcacccctcccactacggacggatttgtcccattgag
acaccagaaggccccaacgccggtttgattggttccttagccacccacgcccgcgttaac
caatacggcttcttagaaacgccatttagaccagtagaaaacggccgggtgagatttgat
caacccgcagtctacatgaccgccgacgaagaggacgacctgcgggtagcaccaggggat
attcctgtagatgaaaatggccacattattggtccccaagtaccagtccgctatcgccag
gaattctccaccacaacaccggaacaagtagactacgtagccgtatcaccagtacagatc
gtctctgtagctaccagtatgattcccttcttggaacatgacgacgcgaaccgcgccctc
atgggttccaatatgcaacggcaagctgtacctctactgaaaccagagcgtccgctagtg
ggaacaggcttagaagcccaaggcgcgagagactcagggatggtaattgtctcccgtacc
gatggggacgttgtctacgtggatgctacagaaatacgtgtccgagttagtgggcaatta
ccagcagctagcggcaaaagcactgacaacggacaactgaccagtcagaaaggacaagaa
attcgctatacagtatccaaatatcagcgttctaaccaagatacctgtctcaaccaaaaa
cccctggtacggattggtgagcgtgtagttgctggtcaggtgctagctgatggctcctcc
acggaaggcggggaattggcactgggacaaaatatcgtcgtcgcttatatgccttgggaa
ggctataactacgaagacgcgattttaatttccgagcgactggtacaggatgatatttac
acctcaattcacattgaaaaatatgaaattgaagcccgccagacaaaactaggcccagaa
gaaattaccagagaaattcctaacgtcggggaagatgccctacgtcagttagatgaacag
ggaatcattcggattggggcttgggtagaagctggagacatactggtaggcaaggtgaca
ccaaaaggtgaatccgatcagccaccagaagaaaagctactacgggcaattttcggggaa
aaagcacgggatgtaagagataactccctccgtgtacccaacggcgaaaaagggcgggtc
gtagacgtgcgcttgtttacccgcgaacaaggggacgaactaccaccaggagccaatatg
gtagtccgggtgtatgtagcccagaagcggaaaatccaagtaggggataaaatggcaggt
cgccacggtaataaagggattatttcccgcatattgcccatagaagatatgccttactta
cccgacggctcccctgtggatattgtcctcaacccccttggtgtacccagccggatgaac
gtgggacaggtatttgagtgtctattgggttgggctggtcataccttgggtgtcaggttt
aagattactcccttcgatgaaatgtacggagaagagtcatctcgccgcattgtgcatggc
aaattgcaagaagccagagacgagacagggaaagattgggtttataacccagatgaccca
ggcaaaatcatggtgttcgatggtcgtacaggggaaccctttgatcgaccagtaactatc
ggcgtagcttatatgctgaaactggtacacctagtagacgataagattcacgctcgttct
acaggcccttactccttggtgactcagcagccattgggtggaaaagcccaacaaggtggt
cagcgctttggagaaatggaagtatgggcattggaagctttcggtgcagcttataccttg
caggaattgctgacggtgaaatcagacgatatgcagggacggaacgaagcattaaatgcg
atcgttaaaggcaaggccattcctcgacctggaacaccagaatccttcaaggtattgatg
cgagaactgcaatccttggggttagacattgccgtacataaagtagaaacccaagctgat
ggtagttccttggatgtcgaagtcgatttaatggcagaccaattagctcgccgtacacca
ccccgaccaacctatgaatcgctatcccgcgaatcattggacgatgacgaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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