KEGG   Acinetobacter nosocomialis: RR32_16055
Entry
RR32_16055        CDS       T04196                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
ano  Acinetobacter nosocomialis
Pathway
ano03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ano00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RR32_16055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ano03019]
    RR32_16055
   03009 Ribosome biogenesis [BR:ano03009]
    RR32_16055
Enzymes [BR:ano01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     RR32_16055
Messenger RNA biogenesis [BR:ano03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RR32_16055
Ribosome biogenesis [BR:ano03009]
 Prokaryotic type
  rRNA processing factors
   RR32_16055
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: AJB49552
Position
3416331..3419660
AA seq 1109 aa
MKRMLINATHAEEVRVALITGNRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAGRQGFLSMREIANSYFQADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEILASLNVPRGMSVIVRTAGIGRTQEELQL
DLQHLLDLWTQIQSTASSGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN
FVKAVMPRQLDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEETALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKERNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERHGEVQVEVPVEIAAFLLNEKRHSLVYLEQTSGVRVTVLPHPHLETPHY
EIAYNPDGFAPSSYERTEATRSSEKELGYESSEWHLEEADHAHVTAPASKNGSAQKKTSH
TTQPVVQQPAAQKAASPCAWLENLFVQKQAQTVDQSRSAQNAAAAIEQMVNTGAVSRGQF
GQVAVPAVAEVAPVQTNNAYISQSPVKQEVREHVEKDDKSQQQRQNNKKRKHKEQREQHH
QSHEQQHQVHEEVVQLSRQEQRELKRQQKRQQQQDQQHQNNDVQQTENVVPRRDRNNQQR
PNRPNRHRDPSVLNENQNTPAPVVVDEKQVKVDVIDAPKHDVMNTALIINVDQGQSEIVA
LTPERQVERVESAPAEVAPESTPAPVAEEKAVVAEAKNEAQPTEQAAQPQIQRASNDPRM
RRRQQREAKQAKAAVPSIAPSQIPTLAQHTIGSLIRHVYGEDCTVLIEQFGLVPTFNRAL
QKFAEQYASTLVVEVTSETEEKKPVTRDAELPSHKPAEEAEPAPVLPLTPSQAPTPRVAN
DPRERRRLAKLAAEQAFEQVKQQHSAQEEVVTPAPVAEETVATAPAETQATAEPEQQPLE
LNQSTEVAQLEAAPVEEKTTEKVAEAPVAKEPAPSKAASKAKAAPEETAAPTEAAADAET
EDAKADKDKPSRPRRPRGRPPKKANPVAE
NT seq 3330 nt   +upstreamnt  +downstreamnt
atgaaacgtatgttgattaatgcaactcatgccgaagaagttcgcgttgcacttatcact
ggtaatcgtctttacgattttgatttagagaatcgtacccgagaacagaaaaaatccaat
atctataaaggccatgtcacccgcgtagaaccttcattagaagctgtttttgttgaatac
ggcgcaggtcgtcaaggcttcttatctatgcgtgaaattgcgaacagctattttcaggca
gacccacgtcaaacttcaaacattcgtgaacttattactgaaggcacagagcttttagtt
caggttgaaaaagaagaacgtggtaataaaggtgcagccctttctacttttatttctctt
gcaggccgttatttggttcttatgccaaacaacccgaaaggtggtggtattagccgtcaa
atttcaggttcagtgcgtgaagagttaaaagaaattttagcgtctttaaatgtacctcgt
ggtatgagcgttattgtacgtaccgctggtattggccgtactcaagaagaattacaactc
gacttacaacacttgcttgacctttggacacaaattcaaagtacagcaagctcaggtcct
tctccgatgcttgttcatcaggaagctggcgttgtaacacgtgcgattcgtgattactta
cgtgatgacgttgctgaaatcttaattgatagtgaacaggcttataacgaagcatataac
tttgttaaagcagtaatgccacgtcaattagacaaattaaaaacttatactttaaacgag
ccattattcgctcattttggtattgaaagccaaattcaaactgcttacgaacgtgaagta
aaacttccttctggcggttcaatcgtaattgaccagactgaagctttagtttcaatcgac
attaactctgcgaaatcaactcgcggacatgatgttgaagaaactgcactgaatacaaac
cttgaagcagcagaagaaattgctcgtcaacttcgtcttcgtgacattggcggtttagtt
gtcatcgacttcatcgatatgactaaagaacgcaatcaacgtatggttgaagcaaaactt
cgtgaagcaacccaaagtgatcgcgcccgtattcagttcggtcagttgtctcgttttggc
ttaatggaaatgagccgtcaacgcttacgtccatcgcttgaagaagcaacaggttatgta
tgccctcgctgtcatggtacaggcatggttcgtgacttacgttcactttctctttcaatc
atgcgtaaagttgaagagattgctcttcgtgaacgtcatggtgaagttcaggttgaagtt
ccagttgaaattgcagccttcttgcttaatgaaaaacgccatagtttggtgtatttagag
caaacttctggtgtacgtgtaactgtattacctcacccgcacttagaaactccacattac
gaaattgcttataacccagatggttttgctccatctagctatgaacgtactgaagcaact
cgctctagtgagaaagagttaggttatgagtcttctgaatggcatttagaagaagcagat
catgctcatgtaacagctcctgcttcaaaaaatggttctgctcagaaaaagacaagccat
acaactcaacctgtagtacagcaacctgcagctcaaaaagcagcaagtccttgtgcatgg
ttagaaaacttatttgttcaaaaacaagcgcaaactgttgatcaatctcgttcagcacaa
aacgctgctgctgcgattgagcaaatggtaaatacgggtgctgttagccgtggtcagttc
ggtcaagtagccgtacctgctgttgcagaagttgcgccagttcaaacaaataacgcttat
atttcacagtcacctgtgaaacaagaagttcgtgaacatgttgaaaaagacgataaatct
cagcaacaacgtcagaacaacaaaaagcgtaaacataaagagcaacgtgagcagcatcac
caatctcatgaacagcaacatcaagtgcatgaagaagtggttcagttgtcacgccaagag
caacgtgagttaaaacgtcagcaaaaacgtcaacaacagcaagatcagcaacatcaaaat
aatgatgtacaacaaactgaaaatgttgttccacgtcgtgatcgcaataatcaacagcgt
ccgaaccgtccaaatcgccaccgcgatccaagcgtattaaatgaaaatcaaaatacgccg
gcaccagttgttgttgatgaaaaacaagttaaagttgatgtgattgatgcacctaagcat
gatgtcatgaacactgctttaattattaatgttgatcaaggtcaaagcgagattgtggcg
cttacacctgaacgccaagttgagcgtgttgagtctgctcctgctgaagttgctccagag
tcaacaccagctcctgttgcagaagagaaagccgttgttgctgaagcaaaaaatgaagct
cagccaactgaacaagctgctcagccacaaatccaacgtgctagcaatgacccacgtatg
cgtcgtcgtcagcaacgtgaggctaaacaagccaaagctgctgtgccatctattgcgcca
tcgcaaattccaactttggcacaacacacgatcggtagcttaattcgtcatgtatatggc
gaagactgtacagtattgattgaacaatttggtttggtaccaacgtttaatcgtgcattg
caaaagtttgcagaacagtatgcaagcactttagtggttgaagtaacttctgaaacagaa
gagaaaaagcctgtaactcgtgatgcagaacttccaagccataaaccggctgaagaagca
gaaccagcaccagtacttccacttactccatcgcaagcaccgactccacgtgttgcaaat
gatccgcgtgaacgtcgccgtttagcaaaattagctgcggagcaagcatttgagcaagtg
aaacaacaacattctgctcaagaagaagttgtaactcctgctcctgtagcagaagaaact
gttgctactgcaccagctgaaacacaagctactgctgaaccagaacagcaaccgcttgaa
cttaatcagtcaactgaagttgcacagcttgaagctgcccctgtagaagaaaaaactaca
gaaaaagtagctgaagctcctgtagcaaaagaacctgcgccatcaaaagcagcaagcaaa
gcgaaagcagctcctgaagaaacagcggctccgactgaagcggcagctgatgctgaaaca
gaagacgctaaagccgacaaggataaaccaagtcgtcctcgccgtcctcgtggccgtccg
ccaaaaaaagctaatcctgtagctgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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