KEGG   Arcobacter nitrofigilis: Arnit_1974
Entry
Arnit_1974        CDS       T01235                                 
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
ant  Arcobacter nitrofigilis
Pathway
ant03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ant00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Arnit_1974
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ant03400]
    Arnit_1974
DNA repair and recombination proteins [BR:ant03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Arnit_1974
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Arnit_1974
SSDB
Motif
Pfam: UvrA_inter ABC_tran UvrA_DNA-bind SMC_N AAA_29 nSTAND1 RsgA_GTPase nSTAND3 AAA_25 AAA_15 APS_kinase AAA_16 AAA_33 DnaJ_CXXCXGXG Viral_helicase1 DUF2688 Tnp_P_element
Other DBs
NCBI-ProteinID: ADG93628
UniProt: D5V016
Position
1970251..1973064
AA seq 937 aa
MTDSIKIYNAKENNLKNINLEIPKNKLIVFTGLSGSGKSTLAFDTLYAEGQRRYIESLSA
YARQFLDKVGKPDVERIEGLTPAIAIDQKTTSKNPRSTVGTITEVYDYFRLLYARVGTQH
CHKCGKPISKMSASDVIEQVLQLPDESKIVILAPLVNRKKGSFADMLESLRGKGYVRATI
DGVMVRLDEEVELEKNKMHTIKVVIDRVVVKAENKDRIAQDVEKALKESFGELEIEIMNH
EEVGTQKHIHYSEHMACFDCKISFEPLEPLTFSFNSPKGACPSCDGLGIRYALDMKKVIN
ESLSIDDGAIRVIYGFNKGYYFKMLKAHCEAAGIDTSVPFDTLEEHQKKSILHGGVEDAV
FTWKRHQLTRKWEGIVKIAYDMIKDEKDLGEYMTEKSCSDCGGNRLKPSSQAVKVANKTI
SEIITLPIEDAFKFFHDEENFKYFNDQSQMISAPILKEIKERIFFLNDVGLGYITLGRDA
RTISGGEAQRIRVASQIGSGLTGVMYVLDEPSIGLHERDTNKLIKTLRALQEKGNTVIVV
EHDKETIEAADFIVDIGPNAGKYGGEIVFAGTLKQMMKAKTLTAQYMTGKKKINYVHNRP
QEKFIEIKNVTINNIKNLDIQIPLKNLCAITGVSGSGKSSLILQTLLPVAKELLNHARKV
NKVDGVSIEGLEDLDKVIYLDQSPIGRTPRSNPATYTGLMDEIRVLFSKTKEAQLRGYQI
GRFSFNVKGGRCEKCQGEGEIKIEMHFLPDIMVKCDECHGKRYNAQTLEILYKGKSISDV
LNMSVDEALEFFKKVPKIFAKLETLQNVGLGYITLGQNAVTLSGGEAQRIKLSKELSKKD
TGNTLYVLDEPTTGLHFADVDRLTKVLHHLVDLGNSVLVIEHNLDVIKNSDWVIDMGPDG
GNKGGQIVDIGTPEQIAANHKKSGSYTGYYLEKELNS
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgacagactcaataaaaatatataatgcaaaagaaaataacttaaaaaatataaaccta
gaaattccaaaaaataaactaatagtttttacaggtcttagtggttcgggaaaatcaact
ttagcttttgatacactatatgcagaaggtcaaagaagatatatagaatcactatctgct
tatgctagacagttcttagataaagttgggaaacctgatgttgaaagaatagaaggatta
actcccgctattgcaattgaccaaaaaacaacttctaaaaatccaagatcaacagttgga
acaatcacagaagtttatgattactttagacttttatatgcaagagtaggaacacaacat
tgtcataaatgtggaaaacctatttcaaagatgagtgcttctgatgtaattgagcaagta
ttacaattaccagatgagtcaaaaatagtaattctagcacccttagtaaacagaaaaaaa
ggttcttttgcagatatgttagagagtcttcgaggtaaaggttatgtaagagccaccatt
gatggagtaatggttagacttgatgaagaagttgaactagaaaaaaataaaatgcacact
atcaaagtagtaatagatagggtcgttgtaaaagctgaaaataaagatagaattgcacaa
gatgttgaaaaagctctaaaagagagttttggagaacttgaaatagagattatgaatcac
gaagaagtaggaacgcaaaaacatattcattactctgaacatatggcttgttttgattgt
aaaatctcttttgaaccacttgaaccattaactttctcatttaactcaccaaaaggtgct
tgtccatcttgtgatggtttaggtattagatatgcacttgacatgaaaaaagtaatcaat
gaaagcttaagtattgatgatggagctattagagttatctatggttttaataaaggttat
tactttaagatgctaaaagcacattgtgaagcagcaggtattgatacttcagttcctttt
gatacactagaagaacatcaaaaaaaatcaatccttcatggtggagttgaagatgcagtt
tttacgtggaaaagacatcaacttacaagaaaatgggaaggtatagttaaaatcgcctat
gacatgataaaagatgaaaaagatttaggtgaatatatgactgaaaagtcttgtagcgat
tgtggtggtaatagacttaaaccctcttctcaagctgttaaagtagctaataaaactatt
tctgagattattaccttaccaatagaagatgcttttaaatttttccatgatgaagaaaac
ttcaaatattttaatgatcagtcacaaatgatttcagctccaattttaaaagagataaaa
gagagaattttctttttaaatgatgttggactaggatatataactttaggaagagatgca
agaacaataagtgggggagaagcccaaagaataagagtagcttcacaaattggttcaggt
cttacgggtgtaatgtatgttcttgatgaaccttcaattggactacatgaaagagataca
aataaactaattaaaactctaagagccttacaagaaaaaggcaatacagtaatagtagta
gaacatgataaagagactattgaagctgcagactttatagtagatattggaccaaatgca
ggtaaatatggtggtgagattgtatttgcaggaacattaaaacaaatgatgaaagcaaaa
actttaactgcacaatatatgactggaaagaaaaaaataaattatgttcacaacagacca
caagaaaaatttattgaaataaaaaatgtaactataaataatataaaaaatcttgatata
cagattcctcttaaaaacctatgtgcaatcacaggagtaagtggaagtggaaagtcttca
cttatattacaaactctacttccagttgcaaaagaacttttaaaccatgctagaaaggta
aataaagtagatggtgtttctattgaaggacttgaagaccttgataaagttatttatctt
gaccaatcaccaataggaagaacgccaagaagtaatccagcaacttatacaggacttatg
gacgaaattagagttcttttttcaaaaacaaaagaagctcaacttagaggttatcaaata
ggaagattttctttcaatgtaaaaggtggaagatgtgaaaaatgtcaaggtgaaggtgaa
ataaaaatcgagatgcacttcttaccagatatcatggttaaatgtgatgaatgtcatggg
aaaagatacaatgctcaaactttagaaattctatataaaggaaaatcaatatctgatgtt
cttaatatgagtgttgatgaagctttagagtttttcaaaaaagtcccaaaaatatttgct
aaactagagactttacaaaatgttggtttaggatatattaccttaggacaaaatgcggta
acactttcagggggagaagctcaaagaataaaactaagtaaagagttaagtaaaaaagat
actggaaatactctttatgtacttgatgaaccaactactggattacattttgcagatgtt
gatagattaacaaaagtattacaccatctagttgatttaggaaattcagtacttgtaatt
gaacataatctcgatgtaataaaaaactctgattgggttattgatatgggtccagatgga
ggaaataaaggtggtcaaatagttgatattggaacacctgaacaaatagcagcaaatcat
aaaaaatctggttcttacacaggatattatttagaaaaagaacttaattcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (25)   

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