KEGG   Azoarcus olearius DQS4: dqs_1137
Entry
dqs_1137          CDS       T04423                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
aoa  Azoarcus olearius DQS4
Pathway
aoa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aoa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    dqs_1137
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aoa03021]
    dqs_1137
   03019 Messenger RNA biogenesis [BR:aoa03019]
    dqs_1137
Transcription machinery [BR:aoa03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     dqs_1137
Messenger RNA biogenesis [BR:aoa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     dqs_1137
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 OB_RNB NACHT Mor AAA AAA_22
Other DBs
NCBI-ProteinID: ANQ84194
Position
complement(1188562..1189869)
AA seq 435 aa
MEEGSASSAESTAAAALHLSELKALHVSQLLEMAVANEIEGANRLRKQELVFALLKNRAR
KGEPIYGDGALEVLPDGFGFLRSPDTSYLAGTDDIYVSPSQIRRFNLHTGDTIEGEIRTP
KDGERYFALVKLDKINGRPPEECKHKILFENLTPLHPQECLKLEREIRGEENVTSRIIDM
IAPIGKGQRGLLVAPPKSGKTVMLQHIAHAITANHPDVELIVLLIDERPEEVTEMQRSVK
GEVVASTFDEPASRHVQVAEMVIEKAKRLTEHKKDVVILLDSLTRLARAYNTVVPASGKV
LTGGVDANALQKPKRFFGAARNIEEGGSLTIIATALIDTGSRMDDVIYEEFKGTGNMELH
LDRRMAEKRVYPAINVNRSGTRREELLMKPDVLQKIWILRKLLYGMDDIDAMEFLLDKVK
ATKGNAEFFDAMRRG
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggaagagggttctgcttcgtccgccgaatccacggctgctgcggccttgcatctgtcg
gagctgaaagctctgcatgtgagccagctgctggaaatggcggttgccaacgaaatcgag
ggtgcgaaccggctccgcaagcaggaactcgtcttcgcgctgctgaagaatcgtgcgcgc
aagggcgagccgatctacggcgacggcgcgcttgaagtcctgccagacggcttcggcttc
ctgcgctcgcccgacacctcgtacctggcgggtacggacgacatctacgtgtcgccctcg
cagatccggcgtttcaatctgcacaccggcgacaccatcgagggcgagatccgcaccccg
aaggatggcgaacgctactttgcgctggtcaagctcgacaagatcaacgggcgaccgccg
gaagagtgcaagcacaagatcctgttcgagaacctcacgccgctgcatccgcaggagtgc
ctgaagctcgaacgcgagatccgcggcgaagagaatgtcaccagccgcatcatcgacatg
atcgcgccgatcggcaaaggccagcgcggcctgctcgtcgccccgccgaagagcggcaag
acggtgatgctgcagcacatcgcccacgcgatcacggccaaccatccggacgtggagttg
atcgtgctgctgatcgacgagcgcccggaagaagtgacggagatgcagcggtcggtgaag
ggcgaggttgtggcctccaccttcgacgaacccgcgtcgcgccatgtgcaagtcgccgaa
atggtgatcgagaaggccaagcgcctgaccgagcacaagaaggacgtggttatcctgctg
gactcccttacccggcttgcccgcgcctacaacaccgtggtgcccgcttccggcaaggtg
ttgaccggcggtgtcgacgccaatgcgctgcagaaacccaagcgtttcttcggtgcggcg
cgcaacatcgaggaaggtggctcgctgaccatcatcgccaccgcgctgatcgacaccggc
agccgcatggacgacgtgatctacgaggagttcaagggcaccggcaacatggagctccac
ctcgaccgacgcatggcggagaagcgcgtctatccggcaatcaacgtgaatcgctccggc
acccggcgcgaagaactgctaatgaagccggacgtgctgcagaagatctggatactgcgc
aagctgctgtatggcatggacgacatcgacgcgatggaattcctgctcgacaaggtcaag
gccaccaagggcaacgccgaattcttcgatgcaatgaggcgcggatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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