KEGG   Amphiprion ocellaris (clown anemonefish): 111564842
Entry
111564842         CDS       T06018                                 
Symbol
gtf2f2
Name
(RefSeq) general transcription factor IIF subunit 2 isoform X1
  KO
K03139  transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    111564842 (gtf2f2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aoce03021]
    111564842 (gtf2f2)
Transcription machinery [BR:aoce03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     111564842 (gtf2f2)
SSDB
Motif
Pfam: TFIIF_beta TFIIF_beta_N DUF5101 Serglycin
Other DBs
NCBI-GeneID: 111564842
NCBI-ProteinID: XP_023120442
Ensembl: ENSAOCG00000009514
Position
Unknown
AA seq 270 aa
MSEKGEVDLTGAKQNTGVWLVKVPKYLSQQWAKATGRGEVGKLRICKKGNQGKAEVSFTL
NEELTVIEGIEDKTVSAPREHPFTMQSVGGQMLAVFTENSSGQSEERSDGSSSGSGAGSG
PDKIALEGVVVQRADCRPAVSESYMRLKKLQIEESSKPARLSQQLKEAVTSNYKPVASHD
YIREYEKKKKEEGKRARADKQQVLDMLFSAFEKHQYYNIKYLVDITQQPVIYLKEILRDI
GIYNVKGAHKNTWELKPEYRHYQGEEKTDE
NT seq 813 nt   +upstreamnt  +downstreamnt
atgtcagaaaagggagaagttgatttaaccggagccaagcagaatacgggtgtgtggctt
gtgaaagtgccaaaatacctctctcagcaatgggcaaaagcgacaggcagaggagaggtt
gggaaactccgaatctgcaagaaaggaaaccaaggaaaagcggaggtgtctttcactttg
aatgaggagctgactgtgattgaaggtatagaagataagacagtgtctgcacctcgggaa
cacccgttcaccatgcagtcagtgggaggtcagatgctggccgtcttcacagagaattca
tcgggccagtcagaagagagatctgatggcagcagctcaggttcgggggcggggtcaggt
ccagataaaatagccctggagggggtggtagtgcagagagcagattgcagacctgctgtc
agtgaaagctatatgaggctgaagaagttacagattgaggagtcctccaagccagccagg
ctgtcacaacagctgaaggaagctgtcaccagcaactacaagcctgtggccagccatgac
tacatccgcgagtatgagaagaagaagaaggaggagggcaagagagccagagcagacaaa
cagcaggtgttggacatgttgttctctgctttcgagaagcaccagtactacaacatcaaa
tacctggtggatatcacccaacagcctgtgatttacttgaaggaaattttgcgcgatatt
ggcatctacaacgtgaagggagcacacaagaacacctgggagctcaagccagagtacaga
cattaccaaggcgaggaaaaaactgacgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system