KEGG   Amphiprion ocellaris (clown anemonefish): 111576932
Entry
111576932         CDS       T06018                                 
Symbol
pnn
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013  Nucleocytoplasmic transport
aoce03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111576932 (pnn)
   03015 mRNA surveillance pathway
    111576932 (pnn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aoce03019]
    111576932 (pnn)
   03041 Spliceosome [BR:aoce03041]
    111576932 (pnn)
Messenger RNA biogenesis [BR:aoce03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111576932 (pnn)
Spliceosome [BR:aoce03041]
 Complex C
  Other components
   EJC/TREX
    111576932 (pnn)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 111576932
NCBI-ProteinID: XP_023138676
Ensembl: ENSAOCG00000012308
Position
Unknown
AA seq 683 aa
MAVVVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNESRPGQVRRLGGPMAGLGGGRGRGI
NLLRRSLSDMGSGGPPAKQRDIEGALLRLAGDQRARRDTRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVSSEKQKRRSEIEQK
LEVQAEAERKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRTK
TKPHIFYLPGKMCSATQKLLDDSTKKLNAVFEERREAFAEHLSKMESRPRRQPNRDQDGN
TAATGTDRPVEGKPAGQVVKVTGNKGTIEMEEDEEEDEEEEEEREKEGDRKVTERDEGEQ
REGGEKEVLKKVEEEEEEGMELSEEGSEKKEGEELKEKEDKEASPGSEEMEVEQGAEKED
RGKEKEVETDSKQGPTDLQNEKTEDIQSSEPTVSSQEAPNTSHQPQPSCPAGEPAGQPPV
TQESSPVPEPQTVCAVPEQDIAISGFKAQDSTVESQIVEEKSGEEALEKLPDSQEAPVIA
PAKEDENGRRGRKKEKESRKGRSRSNSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSSS
SSNSSSRSRSRESGKRKRRPSDKGRDRKKGEERSHHKRGGSAGGGRDSKGSKERRKRRSE
EGRGRSSRSDREHKDRDRKDKRR
NT seq 2052 nt   +upstreamnt  +downstreamnt
atggcggtggtggtgcggagcttgcaggaccagctcgaaaaggcgaaggaaagcttgaaa
aacgtggacgataatattcgtaaattgaccggacgggatcccaatgagtcaagaccgggt
caggtccgtcggctcggcggccccatggcaggcctgggaggaggtagaggccgaggaatc
aacctgctcaggcgtagtctctcagacatgggaagcggcggccctcctgccaagcagagg
gacatcgaaggagccctgctgaggctggcgggggaccagagggccaggagagacacgcgc
cacgacagcgacgccgaagatgatgacgatgtcaaaaagccggcgttgcagtcgtctgta
gtagctacctccaaagagagaacacgccgagatcttattcaggatcaaaccatggatgag
aagggcaaacagaggaatcggcgcatgtttggcctgctgatggggacactgcagaaattc
aagcaagaatccaacgtctcttcagagaagcaaaagcggcgttcagagattgagcagaaa
ctcgaggttcaggctgaggctgagagaaagaaggtggagaatgaaaaacgagagctgttt
gaagagaggagagccaagcagacagagctgagactactggaacagaaagtggaattagct
caactgcaagaggagtggaccagccacaataatcgcctggtgaaatacattcgcacaaag
acgaaacctcacatcttctacctgcctgggaaaatgtgctccgcaacacagaaactcctc
gatgactccaccaagaaactaaatgctgtgtttgaagagaggcgtgaggcttttgctgaa
cacctcagcaagatggagtcgcgcccccggcgacagccaaaccgcgaccaggacggaaac
acagcggcaacggggacggaccgcccggtggagggtaagccagcaggtcaggtagtcaag
gtgacaggtaataagggtactatagaaatggaggaagatgaagaggaggatgaggaggag
gaagaggagagggaaaaagagggggatagaaaggtgacagagagggatgaaggagagcag
agggagggaggggagaaagaagtgttgaaaaaggtagaggaggaggaggaggaagggatg
gagctgagtgaggaggggagtgagaagaaggaaggagaggagctgaaggagaaggaagac
aaggaggccagtccaggttcagaggagatggaggtggagcagggggcagagaaggaggat
agaggtaaggagaaagaggtagaaacagacagtaagcaggggcccacagacctccagaat
gaaaagactgaagacatccagtcctctgaaccaaccgtaagcagtcaggaagcaccaaac
accagtcatcagccccagcccagctgccctgcaggggaaccagcaggacagccccctgtg
acccaggagtcctctccagtcccagagccccagacagtctgtgctgtgcctgagcaggat
attgccatctctgggtttaaggctcaggactctacagtcgagagccagatagtggaagaa
aaatcaggggaagaagccctggaaaaactgcctgattcccaggaggctcctgtcattgcc
cctgctaaagaggatgagaatggcaggagggggaggaagaaggaaaaggaatcgaggaaa
ggtcgcagtcgcagcaacagctcttcgtcttcctcctccggctcctcctccagtggaagt
tcttcttcttcctccggatccagccgctcctcgtcatcgtcttcatcctcctcatcctcg
tcgtccaacagcagcagccgaagtcgcagccgagagagtggcaagcgcaagaggaggccg
tcggataaaggcagggacaggaagaaaggagaagagaggagtcaccacaagagaggaggg
agcgctggaggagggagggactccaagggatcgaaggagaggaggaagaggaggagtgag
gaagggaggggcaggtcttcccggagtgatagggagcataaagatagagataggaaggac
aagagacgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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