KEGG   Amphiprion ocellaris (clown anemonefish): 111577365
Entry
111577365         CDS       T06018                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DQ beta 1 chain-like
  KO
K06752  MHC class II antigen
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04145  Phagosome
aoce04514  Cell adhesion molecules
aoce04672  Intestinal immune network for IgA production
aoce05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    111577365
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    111577365
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    111577365
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    111577365
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aoce04147]
    111577365
Exosome [BR:aoce04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111577365
  Exosomal proteins of epithelial cells
   111577365
  Exosomal proteins of breast milk
   111577365
SSDB
Motif
Pfam: C1-set C2-set_2 MHC_II_beta HRG DUF2545 Ig_3
Other DBs
NCBI-GeneID: 111577365
NCBI-ProteinID: XP_023139379
Position
Unknown
AA seq 272 aa
MGVNIYYEQTGVDLTPYLKRVLLKASRQEQNPVFSNEDFYQSRACCIFRGPHYEDMEYIL
KFSFNENLMAEYNSTRANWTGLTDYSIQVAKIWNRDPYNAVGRAFEKKLLCEDNFIKDMD
VTSAPTIRLKAVKQPSMLVCSAYNFYPKQIEIMWLRNGQEVTSGISSSLAMADGEFYYQI
HSYLEFSPTHGEIITCMVEHYSLSEPALVVWDPSLPVAQRFEIVVGLCGLLLGFAVFLCG
LIYYKKKSAAYVTVCQGRVMIPVELLPADGAS
NT seq 819 nt   +upstreamnt  +downstreamnt
atgggtgtcaacatctattatgagcagaccggtgtggatctaacaccatacctgaagaga
gtccttcttaaagcctctcgtcaggagcagaatccagttttctcaaatgaagatttttac
caatccagagcatgttgcatattcagaggtccacactatgaagatatggagtatatactt
aaattctcttttaacgagaacctgatggcggagtacaacagcacgagagccaactggaca
ggactcacagactattcaattcaagttgcaaaaatttggaacagggacccctataatgct
gttggtagagcatttgaaaagaagttgttgtgcgaagacaacttcatcaaagacatggat
gttacatctgcacccaccatcagactgaaagcagtgaagcagccatccatgcttgtgtgc
agcgcttataatttttacccaaaacaaattgagataatgtggttgcgaaatggacaggaa
gtgacttcaggtatcagttcctctctggcgatggctgatggggagttttactaccagatt
cattcttacctggagttcagcccgactcatggagaaatcatcacctgcatggtggaacac
tacagcctctctgaaccagcactcgtggtctgggacccctcccttcctgtggcacaacga
tttgaaattgttgttggactgtgtggactcctgcttggttttgctgtttttctctgtgga
ttgatttactacaagaaaaagtctgctgcatacgtgactgtctgccaaggacgagtgatg
attcctgtggaactcctccctgcagatggagcctcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system