KEGG   Amphiprion ocellaris (clown anemonefish): 111583625
Entry
111583625         CDS       T06018                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03020  RNA polymerase
aoce03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111583625
  09124 Replication and repair
   03420 Nucleotide excision repair
    111583625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aoce03021]
    111583625
   03400 DNA repair and recombination proteins [BR:aoce03400]
    111583625
Transcription machinery [BR:aoce03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     111583625
DNA repair and recombination proteins [BR:aoce03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111583625
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 111583625
NCBI-ProteinID: XP_023148577
Ensembl: ENSAOCG00000010477
Position
Unknown
AA seq 275 aa
MPYANQPTVKITELTDENVKFVIENTDLAVANSLRRVFMSEVPTIAIDWIQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
FSTNPRVIPVTSRNRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVYPRPEEWPKSEYSEIEEDEVQAPYDPNGKPERFYYNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccgtatgcgaaccagccgacggtgaaaatcacagaactgacagacgagaatgtcaaa
ttcgtcattgagaacacagatttggcggttgccaactctctccgccgtgtcttcatgtca
gaagttcccacaattgcgatcgactggatccagatcgacgccaattcatcagttttgcac
gatgagttcatcgcacacagagtcggcctcataccgctcaccagtgacgacatcgtggac
aaaatgcagtattcaagagattgtacctgcgatgatttctgtccggagtgttcggtggag
ctgacgctggatgtccgatgtaccgaagaccagacacgtcacgtcacatcacgtgacctg
ttctccaccaaccccagagtcatcccagtgacttccaggaaccgagacaacgatcccaat
gactatgttgaacaagacgacattctgctggtgaagcttcgtaaaggtcaggagcttcgg
ctcagagcttacgccaagaaaggcttcgggaaggaacatgccaagtggaacccgacggcg
ggggtgtccttcgagtacgacccagacaatgcactgagacacacggtctacccacgacct
gaggagtggccgaagagcgaatactcagagattgaagaggatgaagttcaagctccctat
gaccccaacgggaagccagaaaggttctattacaacgtggagtcgtgcggctctctgcga
ccggagaccatcgtcatgtcggcgctcgccgtcctcaagaagaagctgagcgacctgcag
acccaactgagccacgagatccagagcgacgtcctcaccatcaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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