KEGG   Amphiprion ocellaris (clown anemonefish): 111586645
Entry
111586645         CDS       T06018                                 
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111586645 (polr1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aoce03021]
    111586645 (polr1b)
Enzymes [BR:aoce01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     111586645 (polr1b)
Transcription machinery [BR:aoce03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     111586645 (polr1b)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpa2_4 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2
Other DBs
NCBI-GeneID: 111586645
NCBI-ProteinID: XP_023152182
Ensembl: ENSAOCG00000004249
Position
Unknown
AA seq 1134 aa
MDSSVKWRNLTKCVSLKNLTDGGFGDLKEQQHAAVQDLTRAHIESFDQAVTVGLSRVVQA
IPPLEFTFKNDRISLVFVDATMYSPVVAKGSICKEMKVFPAECRGRRCSYKGKLVADISW
SVNGVPKGIIKQAMGQVPIMVKSKLCNLHGMSPKELVEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISMRCVKEEHTAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKACVSEMLRIVMEEGCTTRSKV
LNHLGERFRVKMNLPEWYTNEQCANFLLDECICIHLRSPIEKFYLLCLMTRKLFTFAKQE
CMEENPDSITCQEVLTPGQLYLMFLKEKLTAWLVSVKLSFDKRGSKLAAGCTTENVMKMF
NTGSDLTKPFEYLLATGNLHSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAPTLSTITLPALLCSLGVT
PVDGTPGQAFSDCYPVVLDGAVVGWVEADLAPAVADSLRTFKVLREKKIPPWTEIVLVPK
TGKASLYPGLYLFTTPCRMMRPVQNLALGKQESIGTFEQLYMNVGIFEGEIEPGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQTPQSP
LVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWDRGFAHGSIYKTELVD
LADKVRGEDSVVFGTKPGDPKVNDRLDADGLPYIGSTLKYGDPFYGYINLNTGQSFVTFY
KSQESCVVDNIKICSNDTGSGSFKRVCITVRVPRNPTIGDKFASRHGQKGILSCLWPAED
MPFTESGMMPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEENSALDY
FGEMLRAGGYNYYGTERLYSGISGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPLYWSATRHRKTVCTLCGKSDTIDSVSVPYVFRYFIAELAAMNIKVKLDVK
NT seq 3405 nt   +upstreamnt  +downstreamnt
atggactcctcagtcaagtggcgtaatttgacaaaatgtgtgagtctgaaaaatctgaca
gacggagggtttggcgacctgaaggagcaacaacatgctgctgttcaggacctaaccaga
gctcacatcgagtcgtttgaccaggctgtcactgtcggactcagccgcgttgtgcaggcc
atccctcccttggagttcacattcaaaaatgacaggatcagccttgtatttgttgatgcc
accatgtacagcccagtagtcgccaaagggagtatttgcaaagaaatgaaggttttccct
gcagagtgccgtggaagacgatgttcatacaaaggaaagcttgtggcagatatcagctgg
tcagttaacggtgttcccaaaggcatcatcaagcaggccatgggtcaggttccaatcatg
gtgaagtccaagctgtgtaacctgcatggcatgtcccctaaagaacttgtagaacatcat
gaagaagccgaggaaatgggaggttatttcattgtgaatggaattgagaaagttatccga
atgctgattatgccaaggaggaactatcccattgccatgtcaagacctaagtggaagagc
aggggtcagggatacactcagtatggtatttcaatgcgttgcgtgaaggaagaacacaca
gcgattaacatgaaccttcattatctggaaaatggcactgtgatgttgaacttcatctac
cagaaagaactcttcttcctgccactaggctttgcactgaaggccctggtggacttcaca
gactttcagatctaccaggaactgattaaaggtcgtgaggacaattctttttacaaggcg
tgtgtgtctgaaatgctgcgcattgtcatggaggagggctgcaccacccgcagcaaggtt
ctcaatcacctcggagaacgcttcagggttaagatgaaccttccagagtggtacaccaat
gaacagtgtgccaacttcctgttagatgagtgcatctgcatccatctgaggtctcccatc
gagaagttctacctgctgtgtctcatgaccaggaagcttttcacatttgccaagcaggag
tgcatggaagaaaatcctgacagcattacatgtcaggaagtgctgactcctggccagctc
tacctcatgtttctgaaggagaaactgactgcgtggttggtgtctgtgaagttgtccttt
gacaaaagaggcagtaaactggctgcaggatgtaccactgagaatgtgatgaagatgttc
aacacaggctctgatctgactaagccctttgaatatctgctcgctactgggaacctccac
tccaagacaggtcttggcatgctgcagaacaccggcctgtgtgttgtagcagacaagctg
aacttcatccgatacctgtcccacttccgctgtgtgcacagaggagcagctttcgccaag
atgaggaccacttctgttcgtaagctgctgcccgagtcttggggcttcctgtgtcctgtc
cacactccagacggagagccctgtggactcatgaaccacatgacagccagctgtgaaatt
gtggcaccaaccctgtccaccataaccctgcctgctctgctctgctctcttggtgttact
ccagtggatggaactcctggtcaagccttctctgactgctaccctgtggtcctggatgga
gctgttgttggctgggttgaggctgacttagctccagctgtagctgactcactgcgcaca
ttcaaggtgctaagagaaaagaagatccctccttggacagagattgttctggttcccaaa
acaggcaaagccagcttatatccaggcctttaccttttcacaacaccctgccgcatgatg
cgacctgtacaaaacttagctcttggcaaacaggaatccatcggcacctttgaacagctt
tacatgaatgtgggaatctttgagggtgagattgaaccaggagtaaccacacaccaggag
ctgttccctcacagtatgctcagtgtggtggctaacttcatcccttactcagaccacaac
cagagccctaggaacatgtaccagtgtcagatgggtaagcagactatgggtttccccctg
cactcttttatggatcgctccgataacaagctgtaccggctccagaccccacagagccca
ctcgtcaggccctatatgtacgaccactacaacctggacaactaccccagcggcaccaac
gccattgtggccgtcatatcctacacgggctacgacatggaagatgccatgattgtaaac
aagtcgtcctgggacagaggcttcgcccatggaagcatctacaagactgagctggtagac
ttggcagacaaggtgaggggagaagacagtgttgtgtttgggaccaaaccaggtgaccct
aaagtgaatgatagactggatgctgatgggctgccttacattggatcaacacttaagtat
ggagaccccttctacggctacattaacctcaacactggccagagctttgtcaccttctac
aagagccaggagtcctgtgtcgtcgacaatataaagatctgcagcaatgacactggttca
ggtagttttaaacgcgtctgcatcactgtacgagtgccacgaaaccccaccattggtgac
aagtttgccagccgtcatggtcagaagggcatcctgagctgcctgtggccagccgaggac
atgcccttcacagagagtggtatgatgccagacatcctgttcaacccccacggcttcccc
tcacgtatgacgatcgggatgctgatagagagcatggccggcaagtctggcgccctgcac
ggcctgagccacgatgccacacccttcaccttctctgaggagaactctgcactcgactac
ttcggtgaaatgctccgggcaggcggctacaactactacggtactgagcggctctacagt
ggaataagcggtcaggagctggaggcggacatcttcatcggcgtcgtctactaccagcgg
cttcgtcacatggtctctgacaaatttcaagtgaggaccacaggagcgcgagacaaggtg
accaaccagcctgtgggaggaaggaacatccagggaggaatccgttttggggagatggag
cgagatgccctgctggctcacggctcttcattcttgcttcacgatcgcctcttcaactgc
tcggaccggtcagtggctcaggtgtgcgttgactgtggcagccttctttcccctctgttg
gagaaacctccactgtactggtcggccacgcgccaccgcaagactgtctgcactctgtgc
ggcaaaagtgacactattgactcagtgtctgttccttacgtcttccgctacttcatagcg
gagctcgcagcaatgaacatcaaagtcaaactggatgttaagtga

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