KEGG   Asparagus officinalis (garden asparagus): 109826948
Entry
109826948         CDS       T05243                                 
Name
(RefSeq) transcription initiation factor IIB-like isoform X1
  KO
K03124  transcription initiation factor TFIIB
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109826948
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aof03021]
    109826948
Transcription machinery [BR:aof03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     109826948
 Prokaryotic type
  Archaeal type
    TFB
     109826948
SSDB
Motif
Pfam: TFIIB Cyclin_N DUF2653
Other DBs
NCBI-GeneID: 109826948
NCBI-ProteinID: XP_020249545
Position
10:complement(68948861..68954554)
AA seq 199 aa
MADRLNLVATIKDRANEIYKKVESLRSIKGRNQDAIMAACLYIACRQEEKPRTIKEICSV
ANGATKKDIGRAKDFIQKQLGLENDPSIQDMCTISAGDFMRRFCSSLGMNNQAVKAAEEV
VEKIGELDIRRSPISIAAAIIYMITQLSEEKRLLRDIYLATGVAESTIRNSYKDLYPYAS
TVIPEWFAKDKDLKTLYSS
NT seq 600 nt   +upstreamnt  +downstreamnt
atggccgataggttaaatctggttgccacaatcaaggaccgagccaatgaaatatacaag
aaggtggaaagccttagatctattaaaggaagaaaccaagatgcaattatggctgcttgt
ctatacattgcttgtcgacaagaggagaagcctcgcactataaaggagatatgctccgtt
gcaaatggtgctacgaagaaggacattggtcgagcaaaagatttcattcagaagcagtta
gggcttgaaaacgatccatcaatacaggatatgtgtactattagcgcaggagattttatg
agacgtttctgttcatctcttggtatgaataatcaagccgttaaagctgctgaagaagtc
gtcgagaaaataggagagcttgatataaggaggagccccatatctattgcagcagcaatt
atttacatgataacacaattatcagaagagaagagacttctaagagatatatatttggca
acaggagtagcagaaagtacgatacgaaactcatacaaggatctgtatccttatgcttcg
acggtcattccagaatggtttgcgaaggataaggatcttaaaaccctctacagctcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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