KEGG   Asparagus officinalis (garden asparagus): 109830138
Entry
109830138         CDS       T05243                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase ARI7
  KO
K11968  ariadne-1 [EC:2.3.2.31]
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aof04121]
    109830138
Enzymes [BR:aof01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     109830138
Ubiquitin system [BR:aof04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    109830138
SSDB
Motif
Pfam: IBR ARI1_UBAl Ariadne zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-RING_2 ZapD HYLS1_C
Other DBs
NCBI-GeneID: 109830138
NCBI-ProteinID: XP_020252894
Position
2:8475096..8489906
AA seq 590 aa
MDSEDDMHDANDLESVDDDFYSGETGMGSDDGEGDYDFVDNDSDDSDDITSHRQQQNYTI
LSNVDIQQRQEEDISRVSTVLSISRVSACILLRYYNWSVSKVHDEWFADEERVRKAVGLL
ENHVEMPNSKELTCGICFENYPRDMMSAAACGHPFCGACWRGYMGTSISDGPGCLMLRCP
DPSCGAAIGEDMINKLTLEDDKEKYSRYLVRSYIEDNRKTKWCPAPGCEFAVEFVMGSGS
YDVSCNCSYSFCWNCTEEAHRPVDCETVAKWIMKNSAESENMNWILANSKPCPKCKRPIE
KNQGCMHITCTPPCKFEFCWLCLGAWSEHGERTGGFYACNRYESAKQEGAYDECERRREM
AKNSLERYTHYYERWATNQSSRQKALADLHSMQTEKLERLSDKQSQPESQLKFIIEAWLQ
IVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCTEKELQVYLDAETP
MKDFNDFRTKLAGLTSVTRNYFENLVRALETGLKDVGSCNNQATCSKTTSTKXXXXXXXX
XXXXXXXGTSSRPGSGPSRNNEDSNMWSCEHCTYANPRSTNICQMCEQRR
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggattcggaggacgacatgcacgacgccaacgacctcgagtcggtggacgacgatttc
tacagcggcgagactgggatggggagcgatgatggagagggggactacgatttcgttgat
aatgattctgatgattcggatgacatcacctcgcatcggcagcagcaaaattacaccata
ttaagtaatgttgacatacaacaacgccaagaagaagatataagtagggtatctactgta
ctttccatatcacgagtttctgcatgcatccttcttcgctattataactggagtgtcagt
aaggtgcatgatgaatggtttgcagatgaagaaagagttcggaaggctgttggcttgttg
gaaaatcatgtagaaatgcctaattctaaggaactgacatgtggaatttgtttcgagaac
tatccccgtgatatgatgagtgctgctgcttgtggtcatccattttgcggtgcatgctgg
agaggttacatgggcacatcaataagtgatggaccgggatgcttaatgcttcgatgtcct
gacccatcttgtggtgctgctattggtgaagacatgattaataaattgactcttgaggac
gataaagaaaagtattcgcgctaccttgtcaggtcttatattgaagataatagaaagaca
aaatggtgtcctgctcctggctgtgagtttgctgtggagtttgttatgggcagcggaagt
tacgatgttagttgcaattgttcatatagcttttgctggaattgtaccgaagaagctcac
cgtccagtagactgtgagacagtggcaaagtggataatgaaaaacagtgcagagtctgaa
aatatgaattggatattagctaattcaaagccttgtcccaaatgcaagaggccaatcgag
aagaaccagggttgcatgcatattacatgcacacctccgtgcaaatttgagttttgctgg
ttatgtcttggtgcttggtctgaacatggagagaggactggtggtttttatgcgtgtaac
cgctacgaatcagcaaagcaggagggtgcatatgacgaatgtgaaaggaggagagaaatg
gctaaaaattctctcgagaggtatacacattactatgaacgatgggcaactaaccagtca
tcaagacagaaagcacttgcagatctacatagcatgcaaaccgaaaagcttgagaggttg
agtgacaaacaaagccaacctgaatctcagctcaagttcataattgaagcctggttgcag
atagtggagtgtaggcgagtattaaagtggacgtatgcatatgggtattacctaccagag
catgaacatgctaaaagacagttttttgaatatctgcaaggtgaagccgagtctgggtta
gaacggcttcatcagtgtacagagaaggaacttcaagtctaccttgatgctgaaactcca
atgaaagacttcaatgacttccgcacgaagctagctgggctaaccagtgtgactcgaaac
tactttgagaacctagtgagagcactagagacaggattgaaggatgtgggttcttgcaac
aaccaggcaacatgtagcaagaccacaagcaccaagnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnctggaaccagctcaagaccaggcagtggtccgagtcgcaac
aatgaggatagcaatatgtggtcttgtgagcattgcacctatgccaatcctaggtccaca
aatatttgccaaatgtgtgagcaacgccgatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system