KEGG   Asparagus officinalis (garden asparagus): 109830368
Entry
109830368         CDS       T05243                                 
Name
(RefSeq) cell division control protein 48 homolog C-like
  KO
K14571  ribosome biogenesis ATPase
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109830368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aof03009]
    109830368
Ribosome biogenesis [BR:aof03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    109830368
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_5 AAA_16 AAA_22 AAA_33 AAA_2 RNA_helicase AAA_14 TIP49 AAA_28 Viral_helicase1 nSTAND3 AAA_17 AAA_18 Rad17 Bac_DnaA IstB_IS21 Zeta_toxin TsaE AAA_3 Mg_chelatase AAA_11 Nucleolin_bd Vps4_C NB-ARC NACHT Cytidylate_kin2 AAA_19 Parvo_NS1 ATPase_2
Other DBs
NCBI-GeneID: 109830368
NCBI-ProteinID: XP_020253210
Position
1:9976154..10002727
AA seq 781 aa
MGKRMRRGGRSPASSYSVLNRAAKLDSSFDVAAVVNHLRSRYHDYYRIKVQPFTHRVQKT
LDVLHQTQKSSSSHDDDEVNRSTKCRNPNPRRTDESERRLLHAEAEHVRKQKRKIHQADP
SDASTAGSTSTYESDDDDAIFEAKVNPEFDLMKSTLRDNYGNKSKPQKEDENLEIEASAG
KKRMVIGENLTKVESSMKGGVIRREGTRFEDLGGMRDVLDELQMEVLVPLVHPELLKRLG
VRPVAGILLHGPPGCGKTRLAEAIANEAGVPFQKISAPEFISGVSGASEETIRDRFKEAY
RTAPSIIFIDEIDAIASKRENLQREMERRIVTQLMTCMDESHHTQSCDDSQTETSEKKPG
YVLVIGATNRPDALDQALRRPGRFDREISLGVPDENARLEILSVLTRKCNLEGEFNLMKI
ARATPGFVGADLNALVNKAGNLAMRRIMEKRKSGFQEGKTDDWLRQPLSPEELASINVTM
SDFEEATKMVQPSLRREGFSSIPNTKWEDVGGLNSLRKEFDRHIVQRIKNPEDYEELGLN
LEVGFLLHGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTVFSRARTC
SPCILFFDEVDALTTMRGKDGNFGDRLLNQLLIELDGADQRKGVYVIGATNRLEVMDPAV
LRPGRFGTILYVPLPTIEERGLILKALARKKPVAIDVDLDALGRCEACHNFSGADLSALM
NEAAMAALEEKQMTSEDNSSFTRPLVIETSHFEKALVKVGPSVSEKQRIYYEALSRSHRS
A
NT seq 2346 nt   +upstreamnt  +downstreamnt
atggggaagagaatgagacgcggcggccgatcgccagcgtcatcctactccgtcctcaac
cgcgccgcgaagctcgactcctccttcgacgtcgccgccgtcgtcaatcacctccgttcc
cgttatcacgactactaccgcattaaggtccagcctttcacacaccgcgtccagaaaacc
ctagatgtccttcaccaaacccaaaaatcatcttcctcccatgacgacgatgaggtcaac
cgaagcactaaatgtaggaaccctaaccctaggaggaccgatgagtcggagaggagattg
ctccacgctgaggctgagcatgtacggaaacagaagcgcaagatccaccaagctgatcca
tctgatgcctcgacggcaggctcgacctcgacctatgaatctgatgacgacgatgccata
ttcgaggcgaaggtcaatccagaatttgacctaatgaagtccacgctgagggataactat
ggcaataagtcaaaaccgcagaaagaggatgaaaacctagaaattgaagcttctgctggg
aagaagaggatggttataggtgaaaatttaacaaaggtggagtcttcgatgaagggaggg
gtaataagaagggaaggaactaggtttgaggatcttggcgggatgagggatgttttggac
gagttgcagatggaggtgctcgtgccgcttgttcatccggagctgttgaagagactagga
gtccgtccggttgccggaattttgctgcacgggccgccaggttgtgggaagacgaggctt
gcggaggccattgcaaatgaggctggtgtcccctttcagaaaatctctgctcctgaattc
atttcgggtgtctctggtgcttctgaagaaactataagagaccgtttcaaagaggcatac
agaactgctccatcaatcatattcattgatgagatagatgcaattgcttccaagcgagaa
aacctgcaaagggagatggaacgtcggatagtaacacagcttatgacttgcatggatgaa
tcgcatcacactcagtcatgtgatgattcccagacagaaacatctgagaagaagcctggt
tatgttcttgtaatcggagcaacaaacagaccagatgcacttgaccaagctttgaggaga
cctggacggtttgatcgtgagatttctttgggtgtacctgatgaaaatgcacggctagag
atcctgtcagttcttactcggaaatgcaatcttgagggtgaattcaatcttatgaagata
gcaagggctactccaggttttgtgggagctgatttgaacgcactggtgaacaaagctggc
aatctggcaatgagaagaataatggagaagaggaaatctggatttcaagagggaaaaaca
gatgactggttgcggcaaccattgtcccctgaagaactagctagcattaatgttacaatg
tctgattttgaggaagccactaaaatggttcaaccctctttaagacgtgaaggattttcc
tcaatacctaacaccaagtgggaggatgttggtggtctcaactctttgaggaaagagttt
gatcgccatattgttcaacgcataaagaaccctgaggattatgaggaacttggtttgaac
ctggaggttggcttcttgcttcatggacctcctggttgtggtaaaacattgattgccaag
gctgttgcaaatgaggcaggcgccaatttcatacacatcaagggtcctgaacttctgaat
aaatatgttggagaaagtgagctggcagttagaacagtatttagccgtgctagaacatgc
tccccttgcatacttttctttgatgaggtggatgctttgacaactatgcgaggaaaagat
ggaaactttggggatcggctcctcaaccagctactcatagagctagatggtgcagatcag
aggaaaggcgtctatgtcattggagctacaaacagactggaggttatggatcctgctgtc
ttacgaccagggagatttggtacaattctttatgttcctttacctaccattgaagagcgt
ggattgatcctcaaagcacttgctcgtaagaagcctgttgctattgatgtggatttggat
gcgttgggacgttgcgaggcatgccataatttctctggtgctgatctttcggccttgatg
aatgaagctgccatggctgcattggaagagaaacaaatgacttcggaggacaacagttca
tttactagaccgttggtaattgagacatcacattttgagaaagctctggtgaaggttggt
ccgtctgtttcagaaaagcaaaggatttactatgaggccttgtcaaggagccatagatca
gcttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (32)   
   Pfam (32)   
All databases (55)   

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