KEGG   Asparagus officinalis (garden asparagus): 109831920
Entry
109831920         CDS       T05243                                 
Name
(RefSeq) RNA-binding protein 28-like isoform X1
  KO
K14573  nucleolar protein 4
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109831920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aof03009]
    109831920
Ribosome biogenesis [BR:aof03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    109831920
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 109831920
NCBI-ProteinID: XP_020254985
Position
2:83699279..83709391
AA seq 989 aa
MGKRKRNENGGGPARGPDEGQQHCPATVFVSNLPYSFKSKELEEAFVEVGPVKRCFMVTH
QGSEVTRGFGFVQFASVEDAKRAIEVKNGSAIGGRKMRVKLAMHRLPRDQRQEKKNKVCS
EEIKADKDSVFLSTGPKKHNENTQTPDPQEKNQEAPETLAATGGAHQMPQPDGVPTDKAK
GSEKQRVARTVVFGGLLSSEMAVEVFHRAGEVGTLCSVTYPLPKEEIELHGLARDGCKPE
AAAVLFASVKSACRCVGLLHQQEIKNGRVWARQLGGEGSKISKWKVIVRNLPFKIKVNEI
RDIFSSAGFVWDVYIPHVSEQGLSKGFAFVSFTSKRDAENAIKNINGRVVAKRSIAVDWA
VQKKIYVAATKSTSLQDGQSVDSDKEDDVCEDDASIEDVEDRGLGESQHPSEETYTTQKG
SAADESSMLPAEVNFEKEAEVARKVLDNLIKASTGFQPSVGGNSKKTEGTEELLNASDKV
SKEPTVPGTKSTVDTKRSEKTPEELNKSKSDLERTIFISNLPYDIGNEEVKQRFSVFGQV
EFFLPVLHPLTKRPKGTAFLRFGKTSAADAAVTAANAASGLGVVMKGRSLNVLKALDKDS
AHKKGLEKTRNEVQDRRNLYLAKEGEILADSPAAEGVSEFDMKKREVLAQKKAEMLRSPK
FHVSRTRIIIYNLPKTMSEEDVKKLCIDAVLFRASKQQPVIQMVKLLKDVKKGQAVVKKH
PRAVAFVDFKEHEHALVALRVLNNNPETFGPEYRPIVEFAVENIHKIKHRKAKLNESHGN
LEDGMKGHKKAKLDSSNENHGSLEEGMKEHRSSSQTEDANTNRSHKKKLRNMKSKKGHKE
SFKEYSELSEGTKDNVTSRRNKDSSAKLKNGPVAAEQTTEKLQQRGRLKKEAKFTSKKRR
KPQQTEELEPKEEPIGTSNKRKFQNAGKEQQKETKNAKRRRAGASDREAEDKLDMLIQKY
RNKFSQRSSDKSKDAASSGSREVRRWFES
NT seq 2970 nt   +upstreamnt  +downstreamnt
atgggaaagcgtaagaggaacgagaatggtggtgggcccgctcggggccccgacgaaggg
cagcagcactgtcccgccaccgtgtttgtctccaacctcccctattctttcaagtccaaa
gagttggaagaagcgttcgtcgaggtgggccctgtgaagcgctgctttatggtaacccat
caaggttcagaagtaactcgtggctttgggtttgtccaatttgcttctgtggaagatgct
aaacgtgccattgaagttaaaaatggatcagccataggtggtagaaaaatgagagtcaag
cttgcaatgcatcgccttcctagggatcaacgtcaggaaaagaaaaataaagtgtgttcg
gaggagataaaagcagataaagattcagtttttctttctactggtccaaagaaacacaat
gaaaatacgcagacaccagatccgcaagaaaagaaccaagaggccccagaaactttagca
gcaactggtggcgctcatcaaatgccacaacctgatggtgtccctactgataaagcaaaa
ggctcagaaaagcaaagggttgctagaacagtagtatttggtggtcttcttagttccgag
atggcagttgaagtattccatcgagctggcgaggttggcacactatgctctgtaacttat
ccccttccaaaggaagaaattgaacttcatggtcttgctcgagatggatgcaaaccagaa
gctgcagcagtactctttgcaagtgtcaagtcggcatgtcgttgcgtaggattgttgcat
cagcaagagataaagaatgggcgtgtgtgggcacgccaactcggtggggagggatctaag
ataagcaagtggaaagtgatagtcaggaatcttccgtttaagattaaagttaatgagata
cgagatattttctcctccgcaggatttgtctgggatgtatacattccacatgtttcagaa
caagggttgtccaagggttttgcttttgtctcttttacgtccaagagggatgctgaaaat
gccataaaaaatatcaatggccgagtagttgcgaaaagatctattgccgtggattgggct
gtccagaagaaaatttatgttgctgctacaaaatctacctctttgcaagatggacaatca
gttgacagtgacaaagaggatgatgtttgtgaagatgatgcgagtattgaggatgttgag
gatcgtggtctaggagaaagtcagcatccttctgaagaaacttatacaactcagaaaggg
tcagctgctgatgagagtagcatgcttcctgcagaagtaaattttgaaaaggaggcagaa
gttgcaagaaaggttctagataatcttattaaagcctcaactggatttcagccatcagtg
ggggggaactcgaagaaaactgaaggcactgaagaattactgaatgcaagtgataaagta
agcaaagaacctactgttcctggaacgaagtccactgtagataccaaaagatctgaaaaa
acacctgaagaactcaacaagagcaaaagtgatttggagaggacaatcttcataagcaac
cttccgtatgatattggtaacgaagaggtgaagcaaaggttctcagtatttgggcaagtg
gaattttttcttcctgtccttcatcccctcaccaaacgacccaaaggaactgctttctta
aggtttggtaagacatctgcagctgatgcggcagttactgcagcaaatgctgcttctggt
ttgggagttgtaatgaaggggagatcactcaatgttttgaaggctttggacaaggattca
gctcataaaaagggccttgagaagacaagaaatgaggttcaagatcgtcgtaatttatat
ttggcaaaggaaggtgaaattctggccgactctccagcagctgaaggcgtatcagaattt
gatatgaagaagcgtgaagtgttggcccagaagaaggcagaaatgcttcgttctccaaaa
tttcatgtatcaagaactagaattattatttacaatcttcccaagacaatgtcagaagag
gatgtgaagaagctctgtatagatgctgttctttttcgtgcttcaaagcagcagcctgtt
attcaaatggtaaaactcttaaaggacgtcaaaaaaggacaggctgttgtcaagaaacac
ccacgtgctgtagcttttgttgatttcaaagaacacgagcatgcgcttgtagcccttagg
gttcttaacaataatccagaaacttttggcccagagtatcgacctattgtggaatttgct
gttgagaacatccataaaattaagcacaggaaagccaagttaaatgagagtcatggcaac
ttagaagatggaatgaaggggcacaagaaagctaagttggattcttcaaatgaaaatcat
ggcagcttagaagaaggcatgaaggaacaccgttcttcatctcaaacagaagatgctaac
acaaaccgaagtcataagaaaaagttgagaaacatgaaatctaagaaaggccataaggaa
tcttttaaagaatattctgaacttagcgaaggaacgaaagataatgtgacttcaagaaga
aataaagattcttcagccaagttaaagaatgggccagttgcagctgagcaaaccactgaa
aagttgcagcagagaggtcgactgaaaaaagaagcaaaatttacttcaaaaaagagaaga
aaaccacaacaaaccgaagaactggagccaaaagaagaaccaataggcacctcaaataag
aggaaattccaaaatgctggtaaagagcagcagaaggaaacaaaaaatgcaaagaggagg
agagccggggcttcagatagagaagcagaggataagcttgatatgctcatacaaaagtac
cgtaacaagttctcgcagcgaagttctgataaatctaaagacgctgcgagttctggaagt
agagaagttagaagatggtttgaatcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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