KEGG   Asparagus officinalis (garden asparagus): 109835566
Entry
109835566         CDS       T05243                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03082  ATP-dependent chromatin remodeling
aof03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109835566
   03083 Polycomb repressive complex
    109835566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aof03036]
    109835566
Enzymes [BR:aof01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     109835566
Chromosome and associated proteins [BR:aof03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     109835566
   HDAC complexes
    Sin3A-HDAC complex
     109835566
    BRAF-HDAC complex
     109835566
    REST complex
     109835566
    SHIP complex
     109835566
    MiDAC complex
     109835566
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     109835566
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109835566
  Chromatin remodeling factors
   NuRD complex
    109835566
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 109835566
NCBI-ProteinID: XP_020259122
Position
3:complement(107753535..107760328)
AA seq 479 aa
MNPGLGRGVDAKLAKRAAFANTNSVGGPASPPLPAQPAPAPTTSPLHFLRLRLASSRSVT
PDTQHDHQRSLKRFNVCEDCPVFDGLYEFCQTYAGASVGAAVKLNKGTYDIAINWSGGLH
HAKKCEASGFCYVNDIVLAILELLKKHERVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHK
FGDYFPGTGHIRDIGYARGKHYAVNVPLDDGIDDESYHSLFKPIIAKVMEVFQPGAVVLQ
CGADSLSGDRLGCFNLSVKGHAECVRYVRSFNVPLLMLGGGGYTIRNVARCWCYETGVAL
GIELDNKVPEHEYSGYFGPDYNIHVAPSNMENKNSQHSLNDIRVQVLENLSQLQHVPSVQ
FQERPPDTEFPEADEDEEDLDERNDPGYYMEMDDSNHADTTCKSLDHIQDEKANMDVEPE
LMGQGSPKKVNEIVKGVEAITVAMPSSSKVFGENSVIADEQSSRKGQQEEMNRIYGEKL
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgaatcctgggttgggtagaggggtagatgccaaactagcgaaacgggcagcttttgca
aataccaattctgtgggcggcccggcctccccacctcttccggcccaacccgccccggca
ccgacgacctcgccgctccacttcctacgactacgtctcgcttcctcccggtccgtgacc
cccgacacgcagcacgaccaccagaggtccctcaagaggttcaacgtctgcgaggactgc
ccggtcttcgacgggctgtacgagttctgccagacctacgcgggggcctcggtcggggcg
gcggtgaagctgaacaaggggacctacgacatcgccatcaactggtccggggggctgcac
cacgccaagaagtgcgaggcgtcggggttctgctacgtcaacgacatcgtgctcgccatc
ctcgagctgctcaagaagcatgagcgtgttctgtatatagacattgatatccaccatggc
gatggtgtggaagaagccttctacactactgacagagtaatgacggtttctttccataaa
tttggtgactattttcccggaacaggacatatacgcgacattggatatgcaagagggaag
cattatgctgtaaatgttcccttagatgatggaattgatgatgagagctatcattctttg
ttcaaacctataatagccaaagtcatggaagtttttcagcctggtgctgtggtgcttcaa
tgtggtgctgactccttgtctggcgatcggttaggttgctttaatctttctgtcaaaggc
catgctgagtgtgtgaggtatgtgagatctttcaacgtgccactcttgatgcttggtggc
ggtgggtatacaattcgcaatgttgctcgatgttggtgctacgagacaggggttgcactt
ggtattgaacttgataacaaggtgcctgaacatgaatattcaggatattttggtccagac
tacaacattcatgttgctccaagtaatatggaaaacaagaattcacaacattcattgaat
gatataagagtacaggtccttgagaatctttcacagctccaacatgttcctagtgtccaa
tttcaagaaaggccacctgataccgagttcccagaggctgatgaagatgaagaggatttg
gacgaaagaaatgatcctggttattatatggaaatggatgattctaatcatgccgataca
acatgcaaatcccttgaccatattcaggatgagaaagccaatatggatgtggaacctgaa
ctgatgggtcagggatctcctaaaaaggtcaatgaaattgttaaaggtgtcgaggccatc
acagtggcaatgccttctagctcgaaggtgttcggtgagaattcagtcattgcagatgag
cagagcagcagaaagggacaacaagaagaaatgaacagaatatatggcgaaaagctttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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